RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF700Q9H0M5 742 aa16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 PNO1Q9NRX1 252 aaKnown RBP16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 DECR2Q9NUI1 292 aa16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF319Q9P2F9 582 aa16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 RP1P56715 2156 aa16.31■□□□□ 0.2
ECHDC1-214ENST00000474289 A0A087WZY1 265 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 BLACEA4D250 179 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 FRG2CA6NGY1 282 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 GZMBP10144 247 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 FGF7P21781 194 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 JOSD1Q15040 202 aaPredicted RBP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 TSPO2Q5TGU0 170 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 FBXW12Q6X9E4 464 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 SLC35E3Q7Z769 313 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 OR8G5Q8NG78 346 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 OR8B12Q8NGG6 310 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 HSPB1P04792 205 aaKnown RBP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 PGA4P0DJD7 388 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 PGA5P0DJD9 388 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 GLI4P10075 376 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 IL12BP29460 328 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 EWSR1Q01844 656 aaKnown RBP eCLIP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 TMEM31Q5JXX7 168 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 C1orf87Q8N0U7 546 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 MMABQ96EY8 250 aaPredicted RBP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 SLC46A1Q96NT5 459 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 HDHD3Q9BSH5 251 aaPredicted RBP16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 TBL1XR1Q9BZK7 514 aa16.3■□□□□ 0.2
ECHDC1-214ENST00000474289 RRP8O43159 456 aaKnown RBP16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 ST8SIA3O43173 380 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 COX5BP10606 129 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 MYOGP15173 224 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 KIR2DL1P43626 348 aaPredicted RBP16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 FZD2Q14332 565 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 TOMM40LQ969M1 308 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 RAB24Q969Q5 203 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 ADIPOR1Q96A54 375 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 NAA60Q9H7X0 242 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 HSF4Q9ULV5 492 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 ALG1L2C9J202 215 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF205O95201 554 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF43P17038 809 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 COL9A1P20849 921 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 DAP3P51398 398 aaKnown RBP16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 TMEM196Q5HYL7 178 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 C6orf201Q7Z4U5 140 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 NOL4LQ96MY1 436 aaPredicted RBP16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 VN1R1Q9GZP7 353 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 TRANK1O15050 2925 aa16.29■□□□□ 0.2
ECHDC1-214ENST00000474289 FAM221BA6H8Z2 402 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 EREGO14944 169 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 DUSP1P28562 367 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 TFF2Q03403 129 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 CDCP2Q5VXM1 449 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 CYB5R2Q6BCY4 276 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 SP5Q6BEB4 398 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 CRIP3Q6Q6R5 217 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 GRINAQ7Z429 371 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 FBXL14Q8N1E6 418 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 PLPP5Q8NEB5 264 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 NPRL2Q8WTW4 380 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 RTN4IP1Q8WWV3 396 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 EMC6Q9BV81 110 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 MOB1AQ9H8S9 216 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 PITPNC1Q9UKF7 332 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 RTTNQ86VV8 2226 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 DVL1O14640 695 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 DBHP09172 617 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF121P58317 390 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 HLA-DRB3P79483 266 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 RELQ04864 619 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 KISS1Q15726 138 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF506Q5JVG8 444 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 OGFOD3Q6PK18 319 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 OR6X1Q8NH79 312 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 ADAMTS18Q8TE60 1221 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 SLC37A2Q8TED4 501 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 C18orf12Q96KH6 178 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 SEC16AO15027 2179 aa16.28■□□□□ 0.2
ECHDC1-214ENST00000474289 CCDC187A0A096LP49 1063 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 MSTNO14793 375 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 GEMIN2O14893 280 aaKnown RBP16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 CYTIPO60759 359 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 FUT3P21217 361 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 ZNF266Q14584 549 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 BEND2Q8NDZ0 799 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 OR14L1PQ8NHC6 308 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 FAM131CQ96AQ9 280 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 ATG101Q9BSB4 218 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 LHFPL6Q9Y693 200 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 ADAMTS9Q9P2N4 1935 aa16.27■□□□□ 0.2
ECHDC1-214ENST00000474289 IL18BPO95998 194 aa16.27■□□□□ 0.19
ECHDC1-214ENST00000474289 CELA2BP08218 269 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms