RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CEP19Q96LK0 163 aa10.36□□□□□ -0.75
DDX56-209ENST00000473924 CCL13Q99616 98 aa10.36□□□□□ -0.75
DDX56-209ENST00000473924 NRIP2Q9BQI9 281 aa10.36□□□□□ -0.75
DDX56-209ENST00000473924 TMEM138Q9NPI0 162 aa10.36□□□□□ -0.75
DDX56-209ENST00000473924 OR5V1Q9UGF6 321 aa10.36□□□□□ -0.75
DDX56-209ENST00000473924 TEP1Q99973 2627 aaKnown RBP10.36□□□□□ -0.75
DDX56-209ENST00000473924 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 INAFM1C9JVW0 142 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 ACAA1P09110 424 aaPredicted RBP10.35□□□□□ -0.75
DDX56-209ENST00000473924 TMEM225BP0DP42 221 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 CPEP16870 476 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
DDX56-209ENST00000473924 BDKRB2P30411 391 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 NPY4RP50391 375 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 PDZK1IP1Q13113 114 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 TPBGQ13641 420 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 ACSM3Q53FZ2 586 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 DDI2Q5TDH0 399 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 STUMQ69YW2 141 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 ASPHD2Q6ICH7 369 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 FAHD2BQ6P2I3 314 aaPredicted RBP10.35□□□□□ -0.75
DDX56-209ENST00000473924 Q8IYB0 196 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 SPARTQ8N0X7 666 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 OR52N4Q8NGI2 321 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 EMG1Q92979 244 aaKnown RBP10.35□□□□□ -0.75
DDX56-209ENST00000473924 TMEM203Q969S6 136 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 FAHD2AQ96GK7 314 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 MED30Q96HR3 178 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 DERL3Q96Q80 235 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 DNTTIP1Q9H147 329 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 NOX4Q9NPH5 578 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 MTCH1Q9NZJ7 389 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 KAAG1Q9UBP8 84 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
DDX56-209ENST00000473924 TRBV5-7A0A0A0MS05 114 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 A0A0G2JMP0 313 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 A0A0X1KG70 313 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 A8MXK9 166 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 DVL1O14640 695 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 TNFRSF13BO14836 293 aaPredicted RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 NDUFB3O43676 98 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ANGPTL7O43827 346 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 MAS1P04201 325 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ALDOBP05062 364 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 PSG2P11465 335 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 FSTP19883 344 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 HNF1AP20823 631 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 PSMA1P25786 263 aaKnown RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 IL13RA1P78552 427 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 IKZF1Q13422 519 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 INSL4Q14641 139 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 TRAM1Q15629 374 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ARMCX4Q5H9R4 360 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 DCAF12L2Q5VW00 463 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 WDR25Q64LD2 544 aaPredicted RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 ZNF529Q6P280 563 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ZNF773Q6PK81 442 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 RNF144BQ7Z419 303 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 CEACAM19Q7Z692 300 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 PHC2Q8IXK0 858 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 PNLDC1Q8NA58 520 aaKnown RBP10.34□□□□□ -0.75
DDX56-209ENST00000473924 OR4M2Q8NGB6 313 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ANGPTL6Q8NI99 470 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 FCGR1BQ92637 280 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 FAM192AQ9GZU8 254 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 TCF7L1Q9HCS4 588 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 OR14J1Q9UGF5 321 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 FOXJ3Q9UPW0 622 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 ABCA2Q9BZC7 2435 aa10.34□□□□□ -0.75
DDX56-209ENST00000473924 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 IGKV1D-17A0A075B6S4 117 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 TRAV8-7A0A075B6U6 113 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 RFPL4AA6NLU0 287 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 KIAA1324LA8MWY0 1029 aaPredicted RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 RFPL4AL1F8VTS6 287 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 GPX5O75715 221 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 TNFAIP8O95379 198 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 KNG1P01042 644 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 TFF1P04155 84 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 IGFBP3P17936 291 aaPredicted RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 BCL3P20749 454 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 GATA3P23771 443 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 PSMB9P28065 219 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 GABRA5P31644 462 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 PRDX2P32119 198 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 NPBWR2P48146 333 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 CR1LQ2VPA4 569 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 LRRC10Q5BKY1 277 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ATPAF1Q5TC12 328 aaPredicted RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 CD276Q5ZPR3 534 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 BTNL3Q6UXE8 466 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 UNQ9370/PRO34162Q6UXP9 181 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ZNF788Q6ZQV5 615 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms