RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TREM2Q9NZC2 230 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 IL36GQ9NZH8 169 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 SLC7A11Q9UPY5 501 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 DOCK8Q8NF50 2099 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 IGKV1D-43A0A0B4J1Z2 117 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A10PA6NDY2 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A18PA6NE21 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A16PA6NEW6 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RBFOX3A6NFN3 312 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A20PA6NIJ5 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A8PA6NJQ4 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A7PA6NKC0 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 A6NLC8 198 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 GJE1A6NN92 205 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A22PA8MWA6 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A12PA8MX19 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A5PA8MXJ8 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A23PA8MXZ1 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 LINC00587B1AMM8 73 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 H3BML4 177 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 ADAM10O14672 748 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TXNL1O43396 289 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 KCNAB3O43448 404 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A15PP0C7V4 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A13PP0C7W8 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A14PP0C7W9 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM90A24PP0C7X0 464 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 MFAP5Q13361 173 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 SRSF7Q16629 238 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERC4-209ENST00000473533 SLC35E3Q7Z769 313 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 OR1L3Q8NH93 324 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RNASE11Q8TAA1 199 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM213BQ8TBF2 198 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RELTQ969Z4 430 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TVP23CQ96ET8 276 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 C18orf12Q96KH6 178 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RPP25Q9BUL9 199 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 EMC6Q9BV81 110 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 PAPOLGQ9BWT3 736 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 HIPK2Q9H2X6 1198 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 PARPBPQ9NWS1 579 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 GFOD1Q9NXC2 390 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 B3GAT1Q9P2W7 334 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 DHCR7Q9UBM7 475 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 PIGLQ9Y2B2 252 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 LAMA1P25391 3075 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 KIAA0100Q14667 2235 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 SPAG17Q6Q759 2223 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 IGLV3-12A0A075B6K2 115 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TRAV20A0A0B4J274 112 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 PMS2P1A4D2B8 440 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 H3BMH7 237 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 DNPH1O43598 174 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 IFNA1P01562 189 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 CTXN2P0C2S0 81 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 MYOGP15173 224 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 IL11P20809 199 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 UBE2KP61086 200 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 NKX6-1P78426 367 aaPredicted RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 DEFA6Q01524 100 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 MALLQ13021 153 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 SHBQ15464 509 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 C9orf50Q5SZB4 431 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 AKR1C8PQ5T2L2 129 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TMEM211Q6ICI0 200 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 OR2C3Q8N628 320 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 ZNF610Q8N9Z0 462 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 WNT2BQ93097 391 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 BORCS8Q96FH0 119 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 SPACA5Q96QH8 159 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 KLHDC3Q9BQ90 382 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 PLSCR2Q9NRY7 297 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 CD207Q9UJ71 328 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FREM3P0C091 2139 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 NPIPA2E9PIF3 369 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 NPIPA3F8WFD2 350 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 K7N7A8 449 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 M0R135 149 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 NQO2P16083 231 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 GABRR1P24046 479 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TAGLN2P37802 199 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 NKX2-1P43699 371 aaPredicted RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 RPS10P46783 165 aaKnown RBP5.36□□□□□ -1.55
HERC4-209ENST00000473533 RBP2P50120 134 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RND3P61587 244 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FOXO1Q12778 655 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RAB35Q15286 201 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RAB30Q15771 203 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 KHDC3LQ587J8 217 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 LCN10Q6JVE6 187 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 RHBDD2Q6NTF9 364 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 HEPN1Q6WQI6 88 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 ANKRD37Q7Z713 158 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 SFTPA2Q8IWL1 248 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 FAM24BQ8N5W8 94 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 TSTD1Q8NFU3 115 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 MOB3AQ96BX8 217 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 ZNF799Q96GE5 643 aa5.36□□□□□ -1.55
HERC4-209ENST00000473533 MESP1Q9BRJ9 268 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms