RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 IZUMO1RA6ND01 250 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 SEC14L6B5MCN3 397 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 PRMT5O14744 637 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-209ENST00000472044 IGKV1D-16P01601 117 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 COL8A2P25067 703 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 HTR2CP28335 458 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 TEAD1P28347 426 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 TGFBR1P36897 503 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 DYNC1I2Q13409 638 aaKnown RBP1.88□□□□□ -2.11
PTCD3-209ENST00000472044 TAL2Q16559 108 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 KCTD16Q68DU8 428 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 APOBEC3HQ6NTF7 200 aaKnown RBP1.88□□□□□ -2.11
PTCD3-209ENST00000472044 FAM231DQ6ZW35 169 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 TRMT10CQ7L0Y3 403 aaKnown RBP1.88□□□□□ -2.11
PTCD3-209ENST00000472044 LRRC8AQ8IWT6 810 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 LINC00337Q8N6G1 96 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 OR4K2Q8NGD2 314 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 OR6N2Q8NGY6 317 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 NDNFQ8TB73 568 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 YIPF5Q969M3 257 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 YIPF6Q96EC8 236 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 DERL3Q96Q80 235 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 PRORYQ9H606 182 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 FAM60AQ9NP50 221 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 ABCB9Q9NP78 766 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF302Q9NR11 478 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 SLC22A7Q9Y694 548 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 V9GYY9 64 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 NUP205Q92621 2012 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 LTBP4Q8N2S1 1624 aa1.88□□□□□ -2.11
PTCD3-209ENST00000472044 TRAV8-7A0A075B6U6 113 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 KIR2DS1A0A191URI9 304 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 C9JQL5 133 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 RFXANKO14593 260 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 KCNK2O95069 426 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 VAPBO95292 243 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 ARR3P36575 388 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 HTR2BP41595 481 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 CACNA1DQ01668 2161 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 NDUFAF6Q330K2 333 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 CLLU1OSQ5K130 101 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 SLC25A25Q6KCM7 469 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 FAM131AQ6UXB0 335 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 CLEC19AQ6UXS0 136 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 ITPRIPQ8IWB1 547 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 NELFCDQ8IXH7 590 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 CYP4Z2PQ8N1L4 340 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 ZNF555Q8NEP9 628 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 PEBP4Q96S96 227 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 MRPL20Q9BYC9 149 aaKnown RBP1.87□□□□□ -2.11
PTCD3-209ENST00000472044 TSGA10Q9BZW7 698 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 SYT4Q9H2B2 425 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 C12orf4Q9NQ89 552 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 TAS2R1Q9NYW7 299 aa1.87□□□□□ -2.11
PTCD3-209ENST00000472044 KLF13Q9Y2Y9 288 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-209ENST00000472044 BZW2Q9Y6E2 419 aaKnown RBP1.87□□□□□ -2.11
PTCD3-209ENST00000472044 IGKV2-24A0A0C4DH68 120 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 SLC5A10A0PJK1 596 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 GMNCA6NCL1 334 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 C4orf51C9J302 202 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 E7EWF7 191 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 TCAPO15273 167 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 CSTAP01040 98 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 PTNP21246 168 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 BGNP21810 368 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 GPR4P46093 362 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 RPL10AP62906 217 aaKnown RBP1.86□□□□□ -2.11
PTCD3-209ENST00000472044 BIKQ13323 160 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 PMVKQ15126 192 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 VAMP3Q15836 100 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 IDNKQ5T6J7 187 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 FA2HQ7L5A8 372 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 PID1Q7Z2X4 250 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 ZDHHC22Q8N966 263 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 ASCC1Q8N9N2 400 aaKnown RBP1.86□□□□□ -2.11
PTCD3-209ENST00000472044 ZFP62Q8NB50 900 aaPredicted RBP1.86□□□□□ -2.11
PTCD3-209ENST00000472044 OR8A1Q8NGG7 326 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 OR5H2Q8NGV7 314 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 SMIM8Q96KF7 97 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 OR2M4Q96R27 311 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 METTL26Q96S19 204 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 SHANK2-AS3Q9BTD1 123 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 SHCBP1LQ9BZQ2 653 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 TRIM45Q9H8W5 580 aaPredicted RBP1.86□□□□□ -2.11
PTCD3-209ENST00000472044 ANKHQ9HCJ1 492 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 PARP11Q9NR21 331 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 INIPQ9NRY2 104 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 DDIT4Q9NX09 232 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 VAPAQ9P0L0 249 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 RAB23Q9ULC3 237 aa1.86□□□□□ -2.11
PTCD3-209ENST00000472044 IGKV3D-11A0A0A0MRZ8 115 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 NRASP01111 189 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 HRASP01112 189 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 KRASP01116 189 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 IGHG2P01859 326 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 SEC11BP0C7V7 166 aa1.85□□□□□ -2.11
PTCD3-209ENST00000472044 P0C880 135 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms