RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 FBXL3Q9UKT7 428 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 PPIL1Q9Y3C6 166 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 PLEKHG2Q9H7P9 1386 aa0.19□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF608Q9ULD9 1512 aaPredicted RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 PLXNA3P51805 1871 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 TRBV24-1A0A075B6N3 115 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ODF3BA8MYP8 253 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 LINC01619G3V211 115 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 WBP4O75554 376 aaKnown RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 OR2A4O95047 310 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ELK4P28324 431 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 GTF2E2P29084 291 aaKnown RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 SERPINB8P50452 374 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ATP5IP56385 69 aaPredicted RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 LAMTOR4Q0VGL1 99 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 MRPL23Q16540 153 aaKnown RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 TRMT5Q32P41 509 aaKnown RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ANGPTL8Q6UXH0 198 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 PPP1R42Q7Z4L9 355 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 FAM58AQ8N1B3 248 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 JAGN1Q8N5M9 183 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF555Q8NEP9 628 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 OR5AR1Q8NGP9 310 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 PEX13Q92968 403 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 NT5C3BQ969T7 300 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 DDIT4LQ96D03 193 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 FAM19A4Q96LR4 140 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 GSDMAQ96QA5 445 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 OR2A7Q96R45 310 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 GABRG3Q99928 467 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 ZNF251Q9BRH9 671 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 NEUROG2Q9H2A3 272 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 PRSS16Q9NQE7 514 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 TMEM100Q9NV29 134 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 DDX18Q9NVP1 670 aaKnown RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 VPREB3Q9UKI3 123 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 AMMECR1Q9Y4X0 333 aaPredicted RBP0.18□□□□□ -2.38
COMMD3-209ENST00000471350 KMT2EQ8IZD2 1858 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 GBF1Q92538 1859 aa0.18□□□□□ -2.38
COMMD3-209ENST00000471350 UBN2Q6ZU65 1347 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 PXDNLA1KZ92 1463 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 SDK1Q7Z5N4 2213 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 ERI3O43414 337 aaKnown RBP0.17□□□□□ -2.38
COMMD3-209ENST00000471350 TRAPPC3O43617 180 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 CD160O95971 181 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 FTH1P02794 183 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 GTF2F2P13984 249 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 GFAPP14136 432 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 CTLA4P16410 223 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 GABRG2P18507 467 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 MSR1P21757 451 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 RPL10AP62906 217 aaKnown RBP0.17□□□□□ -2.38
COMMD3-209ENST00000471350 HES1Q14469 280 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 HSDL1Q3SXM5 330 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 LINC00303Q3SY05 128 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 Q6ZRU5 148 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 SLC7A5P1Q8MH63 180 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 OR10Z1Q8NGY1 313 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 ELMO1Q92556 727 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 OR52B2Q96RD2 323 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 C20orf24Q9BUV8 137 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 UCK2Q9BZX2 261 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 CYSTM1Q9H1C7 97 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 MCUBQ9NWR8 336 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 OR5V1Q9UGF6 321 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 PRO0628Q9UI54 55 aa0.17□□□□□ -2.38
COMMD3-209ENST00000471350 RCL1Q9Y2P8 373 aaKnown RBP0.17□□□□□ -2.38
COMMD3-209ENST00000471350 COL4A2P08572 1712 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 A0A075B6Q4 140 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 TRAV8-4A0A0B4J246 113 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 PHGR1C9JFL3 82 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 H0Y8G0 127 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 ZBTB5O15062 677 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 EIF3HO15372 352 aaKnown RBP eCLIP0.16□□□□□ -2.38
COMMD3-209ENST00000471350 HCRTO43612 131 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 SLC37A4O43826 429 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 NDUFS5O43920 106 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 SH2D1AO60880 128 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 GPR75O95800 540 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 TTC4O95801 387 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 PDYNP01213 254 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 P01737 135 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 OR12D1P0DN82 309 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 CPMP14384 443 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 IMPA1P29218 277 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 HMOX2P30519 316 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 COILP38432 576 aaPredicted RBP0.16□□□□□ -2.38
COMMD3-209ENST00000471350 GABRA4P48169 554 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 SULT1E1P49888 294 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 TAF7Q15545 349 aaPredicted RBP0.16□□□□□ -2.38
COMMD3-209ENST00000471350 FAM201AQ5SY85 155 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 LRRC66Q68CR7 880 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 CENPPQ6IPU0 288 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 NIPAL1Q6NVV3 410 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 NDUFAF7Q7L592 441 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 ZCCHC24Q8N2G6 241 aaKnown RBP0.16□□□□□ -2.38
COMMD3-209ENST00000471350 ING5Q8WYH8 240 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 C8orf44Q96CB5 159 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 TBC1D31Q96DN5 1066 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 YPEL4Q96NS1 127 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms