RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	NXPH2	O95156	264 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	IL24	Q13007	206 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	PDZK1IP1	Q13113	114 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	ZMYND11	Q15326	602 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	CD200R1L	Q6Q8B3	271 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	GPR141	Q7Z602	305 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	PNLDC1	Q8NA58	520 aa	Known RBP	11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	MAPK1IP1L	Q8NDC0	245 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	OR5T2	Q8NGG2	359 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	TNFAIP8L1	Q8WVP5	186 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	YIPF6	Q96EC8	236 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	SEH1L	Q96EE3	360 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	GAL3ST1	Q99999	423 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	REG4	Q9BYZ8	158 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	WDR13	Q9H1Z4	485 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	SNTG1	Q9NSN8	517 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	TXNL4B	Q9NX01	149 aa	Known RBP	11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	PCDHB10	Q9UN67	800 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	ING4	Q9UNL4	249 aa		11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	AK6	Q9Y3D8	172 aa	Known RBP	11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	NSD1	Q96L73	2696 aa	Predicted RBP	11.45	□□□□□ -0.58
LMNA-210	ENST00000469565	ARHGAP32	A7KAX9	2087 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	TRAV38-1	A0A0B4J264	116 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	OOEP	A6NGQ2	149 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	VWC2L	B2RUY7	222 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	SRRM5	B3KS81	715 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	LGALS8	O00214	317 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	AIRE	O43918	545 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	LHB	P01229	141 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	IGHV2-70	P01814	119 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	CALCB	P10092	127 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	BCL3	P20749	454 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	USF1	P22415	310 aa	Predicted RBP	11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	GAL	P22466	123 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	CFHR2	P36980	270 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	MDH2	P40926	338 aa	Known RBP	11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	OR3A4P	P47883	348 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	LSM3	P62310	102 aa	Known RBP	11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	MICB	Q29980	383 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	TIMM50	Q3ZCQ8	353 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	GLT8D1	Q68CQ7	371 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	LRRTM1	Q86UE6	522 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	NKAIN3	Q8N8D7	197 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	POC1A	Q8NBT0	407 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	CEP19	Q96LK0	163 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	S100A13	Q99584	98 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	SMURF1	Q9HCE7	757 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	MTCH1	Q9NZJ7	389 aa		11.44	□□□□□ -0.58
LMNA-210	ENST00000469565	IGHV4-61	A0A0C4DH41	118 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565		H7C1Q1	480 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	CDRT1	O95170	752 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	GYPA	P02724	150 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	TFAP2A	P05549	437 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	PGA5	P0DJD9	388 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	ADRA2C	P18825	462 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	MPZ	P25189	248 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	FGF9	P31371	208 aa	Predicted RBP	11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	PTGFR	P43088	359 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	NPBWR2	P48146	333 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	SNU13	P55769	128 aa	Known RBP	11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	ZP1	P60852	638 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	AWAT2	Q6E213	333 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	CRIP3	Q6Q6R5	217 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	LRRC28	Q86X40	367 aa	Predicted RBP	11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	MUC20	Q8N307	709 aa	Predicted RBP	11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	OR13F1	Q8NGS4	319 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	OR10K1	Q8NGX5	313 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	EMG1	Q92979	244 aa	Known RBP	11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	KCTD7	Q96MP8	289 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	TMEM246	Q9BRR3	403 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	CENPO	Q9BU64	300 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	FUNDC2	Q9BWH2	189 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	RNF167	Q9H6Y7	350 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	CNTD2	Q9H8S5	307 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	TMEM165	Q9HC07	324 aa		11.43	□□□□□ -0.58
LMNA-210	ENST00000469565	FN1	P02751	2386 aa	Known RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	SMIM30	A4D0T7	59 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	PDCD5	O14737	125 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	HTR3B	O95264	441 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	RPL5	P46777	297 aa	Known RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	GABRA2	P47869	451 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	ALDH3B2	P48448	385 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	RSU1	Q15404	277 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	KCNJ8	Q15842	424 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	GPR107	Q5VW38	600 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	ACP7	Q6ZNF0	438 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	C1QL2	Q7Z5L3	287 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	SPIC	Q8N5J4	248 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	CLDND2	Q8NHS1	167 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	METTL9	Q9H1A3	318 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	PLGRKT	Q9HBL7	147 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	RBFOX1	Q9NWB1	397 aa	Known RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	RASL12	Q9NYN1	266 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	NLK	Q9UBE8	527 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	OR14J1	Q9UGF5	321 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	WNK2	Q9Y3S1	2297 aa		11.42	□□□□□ -0.58
LMNA-210	ENST00000469565	TRAV1-2	A0A0B4J238	106 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms