RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 PPP1CCP36873 323 aaKnown RBP10.54□□□□□ -0.72
VARS2-205ENST00000469358 CSNK1A1P48729 337 aa10.54□□□□□ -0.72
VARS2-205ENST00000469358 EIF2S3LQ2VIR3 472 aaKnown RBP10.54□□□□□ -0.72
VARS2-205ENST00000469358 RHBDD2Q6NTF9 364 aa10.54□□□□□ -0.72
VARS2-205ENST00000469358 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
VARS2-205ENST00000469358 SPSB2Q99619 263 aa10.54□□□□□ -0.72
VARS2-205ENST00000469358 ANXA10Q9UJ72 324 aa10.54□□□□□ -0.72
VARS2-205ENST00000469358 COL6A3P12111 3177 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 CCDC187A0A096LP49 1063 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 PQLC2LA1A4F0 135 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 GPR37O15354 613 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 TXNL1O43396 289 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 APOC1P02654 83 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 HEXAP06865 529 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 GLB1P16278 677 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 PTAFRP25105 342 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 SGK3Q96BR1 496 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 RARRES2Q99969 163 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 CHRDQ9H2X0 955 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 EXPH5Q8NEV8 1989 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 TRBV23-1A0A0A0MS06 115 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 CRYM-AS1A6NIL9 109 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 M0R135 149 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 S100A6P06703 90 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 NQO2P16083 231 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 SUMO3P55854 103 aaPredicted RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 RAB5BP61020 215 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 CLINT1Q14677 625 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 GUK1Q16774 197 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 EIF5AL1Q6IS14 154 aaKnown RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 RHBDD1Q8TEB9 315 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 RTN4IP1Q8WWV3 396 aaPredicted RBP10.53□□□□□ -0.72
VARS2-205ENST00000469358 ZNF799Q96GE5 643 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 RGCCQ9H4X1 137 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 ZNF407Q9C0G0 2248 aa10.53□□□□□ -0.72
VARS2-205ENST00000469358 NUDT19A8MXV4 375 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 IFNA21P01568 189 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 MSR1P21757 451 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 GUCA1AP43080 201 aaPredicted RBP10.52□□□□□ -0.72
VARS2-205ENST00000469358 CAMLGP49069 296 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 HIST3H3Q16695 136 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 HAS2Q92819 552 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 CHST5Q9GZS9 411 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 NIT2Q9NQR4 276 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 TIMM10BQ9Y5J6 103 aa10.52□□□□□ -0.72
VARS2-205ENST00000469358 COL5A1P20908 1838 aaPredicted RBP10.52□□□□□ -0.72
VARS2-205ENST00000469358 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 SERPINE3A8MV23 424 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 JTBO76095 146 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 GRB2P62993 217 aaKnown RBP10.52□□□□□ -0.73
VARS2-205ENST00000469358 CCL20P78556 96 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 RAET1LQ5VY80 246 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 GUSBP11Q6P575 273 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.73
VARS2-205ENST00000469358 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 DEFB126Q9BYW3 111 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 PRRC2CQ9Y520 2896 aaKnown RBP10.52□□□□□ -0.73
VARS2-205ENST00000469358 CD63P08962 238 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 ZNF14P17017 642 aaPredicted RBP10.52□□□□□ -0.73
VARS2-205ENST00000469358 SNCAP37840 140 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 RSU1Q15404 277 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 ABCA11PQ4W5N1 156 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 SLC22A25Q6T423 547 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 Q6ZPA2 131 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 AKR7LQ8NHP1 331 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 SLAMF9Q96A28 289 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 NABP1Q96AH0 204 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 Q96M66 194 aa10.52□□□□□ -0.73
VARS2-205ENST00000469358 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 CDRT15L2A8MXV6 281 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 TAAR5O14804 337 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 ZFAND5O76080 213 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 ONECUT2O95948 504 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 IGKV1D-12P01611 117 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 ZNF728P0DKX0 622 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 IGFBP4P22692 258 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 NTF4P34130 210 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 NCMAPQ5T1S8 102 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 ZNF468Q5VIY5 522 aaPredicted RBP10.51□□□□□ -0.73
VARS2-205ENST00000469358 ZNF774Q6NX45 483 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 FAM213BQ8TBF2 198 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 MAGT1Q9H0U3 335 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 PUS1Q9Y606 427 aaKnown RBP eCLIP10.51□□□□□ -0.73
VARS2-205ENST00000469358 TRAV20A0A0B4J274 112 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 UMAD1C9J7I0 102 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
VARS2-205ENST00000469358 GJC3Q8NFK1 279 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 SPACA9Q96E40 222 aaPredicted RBP10.51□□□□□ -0.73
VARS2-205ENST00000469358 GHRLQ9UBU3 117 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 STARD10Q9Y365 291 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 C5orf52A6NGY3 159 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 FBP1P09467 338 aa10.51□□□□□ -0.73
VARS2-205ENST00000469358 CCL3P10147 92 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms