RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 SCCPDHQ8NBX0 429 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 NPRL2Q8WTW4 380 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 DVL3Q92997 716 aaPredicted RBP6.9□□□□□ -1.31
NPHP3-204ENST00000469232 FBXW5Q969U6 566 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 C14orf79Q96F83 325 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 LPAR5Q9H1C0 372 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 PLEKHF2Q9H8W4 249 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 CBLN4Q9NTU7 201 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 RHBDL2Q9NX52 303 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 MTCH1Q9NZJ7 389 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 POU2F3Q9UKI9 436 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 V9GYH0 126 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A10PA6NDY2 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A18PA6NE21 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A16PA6NEW6 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A20PA6NIJ5 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A12PA8MX19 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A5PA8MXJ8 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A23PA8MXZ1 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 F5H5P2 479 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 IFNL4K9M1U5 179 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 OVOL3O00110 214 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 RAB27BO00194 218 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 SYNGR1O43759 233 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 HPGDSO60760 199 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A15PP0C7V4 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A13PP0C7W8 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A14PP0C7W9 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A24PP0C7X0 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 ELK1P19419 428 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 PMELP40967 661 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 HAAOP46952 286 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 SRP9P49458 86 aaKnown RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 EFNB2P52799 333 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 RPS27AP62979 156 aaKnown RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 MRPS11P82912 194 aaKnown RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 PLA2G7Q13093 441 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 P2RY14Q15391 338 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM189A2Q15884 450 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 AGAP6Q5VW22 663 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 SP5Q6BEB4 398 aaPredicted RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 AWAT2Q6E213 333 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 WDR82Q6UXN9 313 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FAM90A1Q86YD7 464 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 Q8IYB0 196 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 FBXL14Q8N1E6 418 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 TMEM104Q8NE00 496 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 OR10AD1Q8NGE0 317 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 OR51F2Q8NH61 342 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF671Q8TAW3 534 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 ELMOD3Q96FG2 381 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 Q96M66 194 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 OR2V2Q96R30 315 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 NKX3-1Q99801 234 aaPredicted RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 PCDHB16Q9NRJ7 776 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 COMMD3Q9UBI1 195 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 POLDIP2Q9Y2S7 368 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 PKDREJQ9NTG1 2253 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 ICE1Q9Y2F5 2266 aa6.89□□□□□ -1.31
NPHP3-204ENST00000469232 UTP20O75691 2785 aaKnown RBP6.89□□□□□ -1.31
NPHP3-204ENST00000469232 A0A0A6YYD4 124 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SRRM5B3KS81 715 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.88□□□□□ -1.31
NPHP3-204ENST00000469232 H7C417 338 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 TPD52L2O43399 206 aaKnown RBP6.88□□□□□ -1.31
NPHP3-204ENST00000469232 CDC14BO60729 498 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SCGNO76038 276 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 EIF4EP06730 217 aaKnown RBP6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SFTPBP07988 381 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SOD3P08294 240 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 MELTFP08582 738 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 TMEM225BP0DP42 221 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 NR4A2P43354 598 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 ART1P52961 327 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 FGF12P61328 243 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF45Q02386 682 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 IL13RA2Q14627 380 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF146Q15072 292 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 MPPED2Q15777 294 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 NKPD1Q17RQ9 610 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 RAB12Q6IQ22 244 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 HAGHLQ6PII5 290 aaPredicted RBP6.88□□□□□ -1.31
NPHP3-204ENST00000469232 C20orf204Q6ZNR8 217 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SLC25A26Q70HW3 274 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 OR2Z1Q8NG97 314 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 S100ZQ8WXG8 99 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 GPER1Q99527 375 aa6.88□□□□□ -1.31
NPHP3-204ENST00000469232 C6orf62Q9GZU0 229 aaPredicted RBP6.88□□□□□ -1.31
NPHP3-204ENST00000469232 CST11Q9H112 138 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms