RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 YIPF5Q969M3 257 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 WBP1Q96G27 269 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 RGCCQ9H4X1 137 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 GSN-AS1Q9NRJ2 163 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PRR14LQ5THK1 2151 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PRRG2O14669 202 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 IL7P13232 177 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 OR3A4PP47883 348 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 TAS2R60P59551 318 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ZP1P60852 638 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PMS2P11Q13670 270 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 OXA1LQ15070 435 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 RAB11BQ15907 218 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 BHLHA15Q7RTS1 189 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-208ENST00000468300 RTN4RL2Q86UN3 420 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 IZUMO1Q8IYV9 350 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 SYNPRQ8TBG9 265 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CD300LFQ8TDQ1 290 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 HAVCR1Q96D42 359 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ABCB10Q9NRK6 738 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 NPAP1Q9NZP6 1156 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF391Q9UJN7 358 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ETV7Q9Y603 341 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 LOC100289279A0A1B0GTE1 492 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 MEGF11A6BM72 1044 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 OR5H1A6NKK0 313 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PLA2G10O15496 165 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 XRCC2O43543 280 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CTAG2O75638 210 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 SPNP16150 400 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF20P17024 532 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CCNOP22674 350 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CALCRP30988 508 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ERVS71-1P61550 626 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 DEFA6Q01524 100 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 TGFBR3Q03167 851 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 GLT8D1Q68CQ7 371 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 SHISA2Q6UWI4 295 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PET117Q6UWS5 81 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 GDPD1Q8N9F7 314 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 CCDC54Q8NEL0 328 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 OR6M1Q8NGM8 313 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 PP6455Q8WZ26 134 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ST8SIA4Q92187 359 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 APOBEC3DQ96AK3 386 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-208ENST00000468300 S100PBPQ96BU1 408 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 C1QTNF6Q9BXI9 259 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 SLC5A7Q9GZV3 580 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 C19orf12Q9NSK7 152 aa7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF629Q9UEG4 869 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-208ENST00000468300 ATRXP46100 2492 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 PKD1L2Q7Z442 2459 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 SMLR1H3BR10 107 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 SLC31A2O15432 143 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 KDM4BO94953 1096 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 VSIG8P0DPA2 414 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 PTHLHP12272 177 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 CDK2P24941 298 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 RFX2P48378 723 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 FAM27E3Q08E93 113 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 DAZAP2Q15038 168 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MOGAT2Q3SYC2 334 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 OR10K2Q6IF99 312 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 SORCS2Q96PQ0 1159 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MRI1Q9BV20 369 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 GPR173Q9NS66 373 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 PTTG3PQ9NZH4 202 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 FBLN5Q9UBX5 448 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MEMO1Q9Y316 297 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 A0A0A6YYD4 124 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 A0A1W2PQ09 198 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 OR2AT4A6NND4 320 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 TMEM14DPA8MWL7 114 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 FAM25AB3EWG3 89 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 FAM25CB3EWG5 89 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 FAM25GB3EWG6 89 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MSTNO14793 375 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 CECR9P0C854 216 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 PSMB1P20618 241 aaKnown RBP7.09□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF93P35789 620 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MNDAP41218 407 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 ALDH3B1P43353 468 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF81P51508 661 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 IL18Q14116 193 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 KISS1Q15726 138 aa7.09□□□□□ -1.27
BRCA1-208ENST00000468300 GCDHQ92947 438 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-208ENST00000468300 MYEF2Q9P2K5 600 aaKnown RBP7.09□□□□□ -1.27
BRCA1-208ENST00000468300 ADAM20O43506 726 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 FAM157BP0CG42 384 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 ARSBP15848 533 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 BMP5P22003 454 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 NR4A2P43354 598 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 MMP15P51511 669 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 IDH3GP51553 393 aaPredicted RBP7.09□□□□□ -1.28
BRCA1-208ENST00000468300 RIPPLY1Q0D2K3 151 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 CDSNQ15517 529 aa7.09□□□□□ -1.28
BRCA1-208ENST00000468300 TRIM16LQ309B1 348 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms