RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 OR2T27Q8NH04 317 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 PIFOQ8TCI5 191 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 H2AFY2Q9P0M6 372 aaPredicted RBP19.88■□□□□ 0.77
PTCH1-210ENST00000468211 OR14J1Q9UGF5 321 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 ZNF670-ZNF695F2Z2N8 137 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 H3BSH0 61 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 TK1P04183 234 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 COX7A1P24310 79 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 ERVK11-1P61568 191 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 ATP6AP1Q15904 470 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 KDM4DQ6B0I6 523 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 BCAS4Q8TDM0 211 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 MNTQ99583 582 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 TBX5Q99593 518 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 PRRG3Q9BZD7 231 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 SNX5Q9Y5X3 404 aa19.87■□□□□ 0.77
PTCH1-210ENST00000468211 MEX3AA1L020 520 aaKnown RBP19.86■□□□□ 0.77
PTCH1-210ENST00000468211 F8VVB4 439 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 F8VWA3 439 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 G3V2T6 193 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 CHST1O43916 411 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 RPP14O95059 124 aaKnown RBP19.86■□□□□ 0.77
PTCH1-210ENST00000468211 PIPP12273 146 aaPredicted RBP19.86■□□□□ 0.77
PTCH1-210ENST00000468211 EFNB2P52799 333 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 DLX6P56179 175 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 ODF4Q2M2E3 257 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 ZNF782Q6ZMW2 699 aaPredicted RBP19.86■□□□□ 0.77
PTCH1-210ENST00000468211 LHFPL4Q7Z7J7 247 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 TRMT10AQ8TBZ6 339 aaKnown RBP19.86■□□□□ 0.77
PTCH1-210ENST00000468211 HEXA-AS1Q9H8Q6 139 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 FOXJ3Q9UPW0 622 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 POLDIP2Q9Y2S7 368 aa19.86■□□□□ 0.77
PTCH1-210ENST00000468211 APOL3O95236 402 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 CCL1P22362 96 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 KIR2DS4P43632 304 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 C2orf68Q2NKX9 166 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 DYNAPQ8N1N2 210 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 FAM234AQ9H0X4 552 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 USE1Q9NZ43 259 aa19.85■□□□□ 0.77
PTCH1-210ENST00000468211 IGKV1-27A0A075B6S5 117 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 POLR2IP36954 125 aaKnown RBP19.84■□□□□ 0.77
PTCH1-210ENST00000468211 ACTR3P61158 418 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 UBE2V2Q15819 145 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 AANATQ16613 207 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 AMIGO2Q86SJ2 522 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 CATSPERDQ86XM0 798 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 YIPF7Q8N8F6 280 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 C11orf44Q8N8P7 122 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 GABARAPL1Q9H0R8 117 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 PLXNB1O43157 2135 aa19.84■□□□□ 0.77
PTCH1-210ENST00000468211 A0A1W2PPH5 198 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 FAM230AA0A1W2PPH8 454 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 A0A1W2PQL4 384 aaPredicted RBP19.83■□□□□ 0.77
PTCH1-210ENST00000468211 DHRS7CA6NNS2 312 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 K7N7A8 449 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 CSF1P09603 554 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 COL10A1Q03692 680 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 IL24Q13007 206 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 HERPUD1Q15011 391 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 GID4Q8IVV7 300 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 OR4C13Q8NGP0 309 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 PKIBQ9C010 78 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 MTCH1Q9NZJ7 389 aa19.83■□□□□ 0.77
PTCH1-210ENST00000468211 FAM90A8PA6NJQ4 464 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 C17orf98A8MV24 154 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 ZNF737O75373 536 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 PLA1AQ53H76 456 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 LDLRAD2Q5SZI1 272 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 CIB1Q99828 191 aa19.82■□□□□ 0.76
PTCH1-210ENST00000468211 INMTO95050 263 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 KRT8P05787 483 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 RAB13P51153 203 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 BNIP1Q12981 228 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 Q6ZTK2 550 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 ZDHHC13Q8IUH4 622 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 PRSS35Q8N3Z0 413 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 KLHDC1Q8N7A1 406 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 ASCC1Q8N9N2 400 aaKnown RBP19.81■□□□□ 0.76
PTCH1-210ENST00000468211 CFHR4Q92496 578 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 FAM53CQ9NYF3 392 aa19.81■□□□□ 0.76
PTCH1-210ENST00000468211 WARS2Q9UGM6 360 aaKnown RBP19.81■□□□□ 0.76
PTCH1-210ENST00000468211 hCG_1809904A0A1W2PP81 198 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 A0A1W2PPE2 198 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 A0A1W2PR64 198 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 A0A1W2PRV1 198 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 FASP25445 335 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 HTR1FP30939 366 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 LGALS4P56470 323 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 CCBE1Q6UXH8 406 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-210ENST00000468211 TCF23Q7RTU1 214 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 OR2T6Q8NHC8 308 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 SLAMF9Q96A28 289 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 RANBP3Q9H6Z4 567 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-210ENST00000468211 AP4S1Q9Y587 144 aa19.8■□□□□ 0.76
PTCH1-210ENST00000468211 METTL15A6NJ78 407 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 ODF3BA8MYP8 253 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 SYT7O43581 403 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 OR2T7P0C7T2 308 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 OR10H4Q8NGA5 316 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 RNF166Q96A37 237 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms