RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NEUROG1Q92886 237 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ORAI1Q96D31 301 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LINC00052Q96N35 136 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 CHCHD6Q9BRQ6 235 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 EXOSC4Q9NPD3 245 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 STUB1Q9UNE7 303 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 DHDHQ9UQ10 334 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RNF115Q9Y4L5 304 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SPG11Q96JI7 2443 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FBN2P35556 2912 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TRBV5-5A0A0J9YX44 114 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF879B4DU55 563 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RGS9O75916 674 aaPredicted RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SERPINA3P01011 423 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 GSK3AP49840 483 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LSM3P62310 102 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FGL1Q08830 312 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 OR8B8Q15620 311 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RNF212Q495C1 297 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 C1orf174Q8IYL3 243 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 OPA3Q9H6K4 179 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RNF167Q9H6Y7 350 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PLEKHA1Q9HB21 404 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 MCUBQ9NWR8 336 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PURGQ9UJV8 347 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PIGLQ9Y2B2 252 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ATP23Q9Y6H3 246 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 V9GYS6 101 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TRDV1A0A1B0GX56 115 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RPS10-NUDT3A0A1W2PQS6 291 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FAM221AA4D161 298 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ANKRD61A6NGH8 418 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 AIREO43918 545 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 MED6O75586 246 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 IFNA7P01567 189 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FAHP16930 419 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PTBP1P26599 531 aaKnown RBP eCLIP5.88□□□□□ -1.477e-6■□□□□ 8.1
SCAF4-204ENST00000467731 THBS4P35443 961 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TGFBR1P36897 503 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PSG7Q13046 419 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ALKBH6Q3KRA9 238 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF718Q3SXZ3 478 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TIMM50Q3ZCQ8 353 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 OR2T2Q6IF00 324 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 CEACAM19Q7Z692 300 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LRP11Q86VZ4 500 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SEMA6DQ8NFY4 1073 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SETD6Q8TBK2 473 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 CMBLQ96DG6 245 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ADAT3Q96EY9 351 aaPredicted RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 DERL3Q96Q80 235 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PPIL3Q9H2H8 161 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 NOX4Q9NPH5 578 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ASH1LQ9NR48 2969 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TXNL4BQ9NX01 149 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SSR3Q9UNL2 185 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 DSCAMO60469 2012 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 CHD3Q12873 2000 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 A0A1W2PPR1 153 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GGT3PA6NGU5 568 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 E7EQL1 145 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 LILRA1O75019 489 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 CD2P06729 351 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 HCKP08631 526 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 TUBG1P23258 451 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 MAPK3P27361 379 aaPredicted RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GCH1P30793 250 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 MAP2K3P46734 347 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 RPS23P62266 143 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 HFEQ30201 348 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 DMRTC1Q5HYR2 192 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 MBNL2Q5VZF2 373 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 ASPHD2Q6ICH7 369 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 SLC25A24Q6NUK1 477 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 Q6ZSR3 168 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 OR5AS1Q8N127 324 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 DYNC2LI1Q8TCX1 351 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 RFT1Q96AA3 541 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 FGGYQ96C11 551 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 HYLS1Q96M11 299 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 SYT3Q9BQG1 590 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 C2orf88Q9BSF0 95 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 TMEM204Q9BSN7 226 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 TUBG2Q9NRH3 451 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 DUSP13Q9UII6 198 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 ABCA12Q86UK0 2595 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 A6NNC1 897 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 DHRS7CA6NNS2 312 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 CD300LBA8K4G0 201 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 SULT1C2O00338 296 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 PIN1P1O15428 100 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GATBO75879 557 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GABARAPO95166 117 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 PTBP3O95758 552 aaKnown RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 RLN2P04090 185 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 OR4E1P0C645 316 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 GALP22466 123 aa5.87□□□□□ -1.47
SCAF4-204ENST00000467731 FGF9P31371 208 aaPredicted RBP5.87□□□□□ -1.47
SCAF4-204ENST00000467731 KLF3P57682 345 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms