RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SDK2Q58EX2 2172 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 RFPL4AA6NLU0 287 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 RFPL4AL1F8VTS6 287 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 TTRP02766 147 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 PRSS12P56730 875 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 TMEM251Q8N6I4 163 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 FLVCR1-AS1Q8TAF5 88 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF75AQ96N20 296 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 PLA2G10O15496 165 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 KLF4O43474 513 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 UPK3AO75631 287 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 ZIC2O95409 532 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 NANPQ8TBE9 248 aa12.14□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF107Q9UII5 783 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 FNDC1Q4ZHG4 1894 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-203ENST00000467558 LNP1A1A4G5 178 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 GMDSO60547 372 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 ALX3O95076 343 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 HOXA6P31267 233 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 GMPPAQ96IJ6 420 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-203ENST00000467558 SLC26A1Q9H2B4 701 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PPP1R3EQ9H7J1 279 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-203ENST00000467558 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 MTCL1Q9Y4B5 1905 aaKnown RBP12.13□□□□□ -0.47
BRAT1-203ENST00000467558 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 TGFBR3LH3BV60 316 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 LGALS8O00214 317 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 MICBQ29980 383 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 SPANXN5Q5MJ07 72 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 CST9LP1Q5W188 147 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 ZNF626Q68DY1 528 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PIK3IP1Q96FE7 263 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 SLC25A32Q9H2D1 315 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 A0A1W2PNV4 684 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PGA4P0DJD7 388 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PGA3P0DJD8 388 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
BRAT1-203ENST00000467558 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 C11orf87Q6NUJ2 197 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
BRAT1-203ENST00000467558 SSSCA1O60232 199 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 ICMTO60725 284 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 THY1P04216 161 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 ACP1P24666 158 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 MDH2P40926 338 aaKnown RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 MPPED2Q15777 294 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 PTX4Q96A99 478 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 PECRQ9BY49 303 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 CACFD1Q9UGQ2 172 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 PCDHGA9Q9Y5G4 932 aaKnown RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 K7ESF4 209 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 SOCS1O15524 211 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 DUS4LO95620 317 aaKnown RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 VSIG8P0DPA2 414 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 ZBTB25P24278 435 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 OR10X1Q8NGY0 326 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 RAB18Q9NP72 206 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 AMDHD2Q9Y303 409 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 BTN1A1Q13410 526 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 RTL8BQ17RB0 113 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 MALSU1Q96EH3 234 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 NPIPB13A6NJU9 1138 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 SFT2D2O95562 160 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 EGR4Q05215 589 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 SLC36A1Q7Z2H8 476 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 AMELYQ99218 206 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 TMED3Q9Y3Q3 217 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
BRAT1-203ENST00000467558 PUS1Q9Y606 427 aaKnown RBP eCLIP12.12□□□□□ -0.47
BRAT1-203ENST00000467558 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 A0A0U1RQV5 110 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 RECKO95980 971 aa12.11□□□□□ -0.47
BRAT1-203ENST00000467558 UBE2KP61086 200 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms