RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PECRQ9BY49 303 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 SLC19A3Q9BZV2 496 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 ARV1Q9H2C2 271 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 NMNAT1Q9HAN9 279 aaPredicted RBP2.8□□□□□ -1.96
VPS50-209ENST00000467326 UGT1A7Q9HAW7 530 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 INIPQ9NRY2 104 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 CMTM6Q9NX76 183 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 TREM2Q9NZC2 230 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 OR1A1Q9P1Q5 309 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 ANXA10Q9UJ72 324 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 HHLA2Q9UM44 414 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 MOKQ9UQ07 419 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 ALG5Q9Y673 324 aa2.8□□□□□ -1.96
VPS50-209ENST00000467326 PBRM1Q86U86 1689 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RIMS2Q9UQ26 1411 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 CPDO75976 1380 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 GON4LQ3T8J9 2241 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 IGKV1D-8A0A087WSZ0 117 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RBMY1BA6NDE4 496 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 RBMY1EA6NEQ0 496 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 SMIM9A6NGZ8 99 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZNF729A6NN14 1252 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZNF726A6NNF4 738 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 KMOO15229 486 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 PLIN3O60664 434 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 NOS1APO75052 506 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 CNMDO75829 334 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 VENTXO95231 258 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 KLF8O95600 359 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 SLC25A27O95847 323 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 THY1P04216 161 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 GUSBP08236 651 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 CST2P09228 141 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RBMY1DP0C7P1 496 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZDHHC11BP0C7U3 371 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RBMY1A1P0DJD3 496 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 PGA4P0DJD7 388 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 PGA3P0DJD8 388 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 FOLR1P15328 257 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 KCNE1P15382 129 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 WARSP23381 471 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 PMELP40967 661 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RAP1BP61224 184 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 SELENOTP62341 195 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 MXD1Q05195 221 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 TCP10Q12799 353 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 FAM53BQ14153 422 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 TSNQ15631 228 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 TMEM97Q5BJF2 176 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 TEX30Q5JUR7 227 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 FHL5Q5TD97 284 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 ANKRD22Q5VYY1 191 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 PHF13Q86YI8 300 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 LRRC25Q8N386 305 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZADH2Q8N4Q0 377 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 ARRDC1Q8N5I2 433 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 GATD1Q8NB37 220 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 UBAC2Q8NBM4 344 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 TMEM161BQ8NDZ6 487 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 OR10G3Q8NGC4 313 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 OR10W1Q8NGF6 305 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 OR2A12Q8NGT7 310 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 PIFOQ8TCI5 191 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 CYGBQ8WWM9 190 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RDH5Q92781 318 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 SLC25A38Q96DW6 304 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 PGLYRP3Q96LB9 341 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RDH12Q96NR8 316 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 COL21A1Q96P44 957 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 OR2V2Q96R30 315 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 CMSS1Q9BQ75 279 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZNF2Q9BSG1 426 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 MS4A6AQ9H2W1 248 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 BOLA2Q9H3K6 86 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 RPF2Q9H7B2 306 aaKnown RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 ZNF430Q9H8G1 570 aaPredicted RBP2.79□□□□□ -1.96
VPS50-209ENST00000467326 RBM22Q9NW64 420 aaKnown RBP eCLIP2.79□□□□□ -1.96
VPS50-209ENST00000467326 SMPXQ9UHP9 88 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 KLHL21Q9UJP4 597 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 GINS2Q9Y248 185 aa2.79□□□□□ -1.96
VPS50-209ENST00000467326 NCOA1Q15788 1441 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 NUP155O75694 1391 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 CENPVL3A0A0U1RRI6 287 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 METTL15A6NJ78 407 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 FOXI3A8MTJ6 420 aaPredicted RBP2.78□□□□□ -1.96
VPS50-209ENST00000467326 C12orf77C9JDV5 145 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 K7ENP7 123 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 SLC17A2O00624 439 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 MYL12BO14950 172 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 AGPAT2O15120 278 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 CHP2O43745 196 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 RDH16O75452 317 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 MMP7P09237 267 aaPredicted RBP2.78□□□□□ -1.96
VPS50-209ENST00000467326 IFI30P13284 250 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 AKR1C4P17516 323 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 KLK2P20151 261 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 VDAC1P21796 283 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 CCR7P32248 378 aa2.78□□□□□ -1.96
VPS50-209ENST00000467326 GABRA4P48169 554 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms