RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TMEM178BH3BS89 294 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 IFNL4K9M1U5 179 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 LDLRAD4O15165 306 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 CDC14BO60729 498 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 SFTPBP07988 381 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 SLC2A2P11168 524 aaPredicted RBP9.37□□□□□ -0.91
VCP-204ENST00000466100 HTR2CP28335 458 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 NPBWR2P48146 333 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 QRFPP83859 136 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 RAB11BQ15907 218 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 HES5Q5TA89 166 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 DNM1P46Q6ZS02 220 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 MKXQ8IYA7 352 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 PNLDC1Q8NA58 520 aaKnown RBP9.37□□□□□ -0.91
VCP-204ENST00000466100 OR51F2Q8NH61 342 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 LRRC29Q8WV35 223 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 RDH5Q92781 318 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 SLAMF9Q96A28 289 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 FAM192AQ9GZU8 254 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 DLL4Q9NR61 685 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 TMEM106BQ9NUM4 274 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 RNF7Q9UBF6 113 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 FBLN5Q9UBX5 448 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 STEAP1Q9UHE8 339 aa9.37□□□□□ -0.91
VCP-204ENST00000466100 A0A1W2PP11 408 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 hCG_1807616A0A1W2PRN6 198 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 WNT9BO14905 357 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 AKR7A2O43488 359 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 TMEM127O75204 238 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 BPNT1O95861 308 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 CYB5R3P00387 301 aaPredicted RBP9.36□□□□□ -0.91
VCP-204ENST00000466100 TMEM225BP0DP42 221 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 BCL3P20749 454 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 DNASE1P24855 282 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 ATP5J2P56134 94 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 CLDN12P56749 244 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 UNC119Q13432 240 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 P2RY14Q15391 338 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 DGUOKQ16854 277 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 DEFB113Q30KQ7 82 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 AWAT2Q6E213 333 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 ELP2Q6IA86 826 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 CROCCP3Q8IVE0 287 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 LRRC75A-AS1Q8N1F1 130 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 ZNF525Q8N782 197 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 OR11L1Q8NGX0 322 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 ZNF671Q8TAW3 534 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 HPS1Q92902 700 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 PERPQ96FX8 193 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 CEP19Q96LK0 163 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 WDR13Q9H1Z4 485 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 KCNK15Q9H427 330 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 PLGRKTQ9HBL7 147 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
VCP-204ENST00000466100 SMURF1Q9HCE7 757 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 RBFOX1Q9NWB1 397 aaKnown RBP9.36□□□□□ -0.91
VCP-204ENST00000466100 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
VCP-204ENST00000466100 DAPK2Q9UIK4 370 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 DSCAML1Q8TD84 2053 aa9.36□□□□□ -0.91
VCP-204ENST00000466100 TMEM14DPA8MWL7 114 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 FSTL3O95633 263 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 UBBP0CG47 229 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 ZNF182P17025 639 aaPredicted RBP9.35□□□□□ -0.91
VCP-204ENST00000466100 GIFP27352 417 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 CD80P33681 288 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 PLA2G7Q13093 441 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 HFEQ30201 348 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 FAM201AQ5SY85 155 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 TEX36Q5VZQ5 186 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 ACP7Q6ZNF0 438 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 KRTAP1-3Q8IUG1 177 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 Q8IYB0 196 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 BATF2Q8N1L9 274 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 TMEM104Q8NE00 496 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 OR51D1Q8NGF3 324 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 OR10K1Q8NGX5 313 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 CCL17Q92583 94 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 FAM3DQ96BQ1 224 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 SEH1LQ96EE3 360 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
VCP-204ENST00000466100 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 LIN7BQ9HAP6 207 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 RHOFQ9HBH0 211 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 MYOZ1Q9NP98 299 aaPredicted RBP9.35□□□□□ -0.91
VCP-204ENST00000466100 IL36RNQ9UBH0 155 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 GHRLQ9UBU3 117 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 OR5V1Q9UGF6 321 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 ING4Q9UNL4 249 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 NPTNQ9Y639 398 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
VCP-204ENST00000466100 MED13LQ71F56 2210 aa9.35□□□□□ -0.91
VCP-204ENST00000466100 TMEM272A0A1B0GTI8 110 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms