RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 FBXO9Q9UK97 447 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 SLC7A11Q9UPY5 501 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CMAHPQ9Y471 501 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 TLN1Q9Y490 2541 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 ACACBO00763 2458 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PCNX1Q96RV3 2341 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PQLC2LA1A4F0 135 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 TMEM210A6NLX4 147 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 H3BUI4 141 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 M0R1B8 84 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 TPD52L2O43399 206 aaKnown RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 AKR7A2O43488 359 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 CHRM2P08172 466 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ADH4P08319 380 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 IGFBP2P18065 325 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 MPZP25189 248 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 LOXP28300 417 aaPredicted RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 GCH1P30793 250 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 CFHR2P36980 270 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PTGFRP43088 359 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ZNF83P51522 516 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 CAV3P56539 151 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 SELENOVP59797 346 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 RAP2BP61225 183 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 GNG3P63215 75 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 QRFPP83859 136 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 SPOCK1Q08629 439 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 DAZAP2Q15038 168 aaPredicted RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 RAB11BQ15907 218 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 IGFBP7Q16270 282 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 BEX5Q5H9J7 111 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ELP2Q6IA86 826 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 RAB12Q6IQ22 244 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PYHIN1Q6K0P9 492 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 DNM1P46Q6ZS02 220 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 MOB3CQ70IA8 216 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ANGPTL5Q86XS5 388 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ZNF573Q86YE8 665 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 FAM89BQ8N5H3 189 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 GDPD1Q8N9F7 314 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PNLDC1Q8NA58 520 aaKnown RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 OR56B2PQ8NGI1 322 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 OR13C9Q8NGT0 318 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 OR13G1Q8NGZ3 307 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 KCNG3Q8TAE7 436 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 SYNPRQ8TBG9 265 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 FAM222BQ8WU58 562 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 TMEM171Q8WVE6 324 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 OR5P3Q8WZ94 311 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PIGCQ92535 297 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 BORCS5Q969J3 196 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 FAM3DQ96BQ1 224 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 ORAI1Q96D31 301 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 BORCS8Q96FH0 119 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 S100A16Q96FQ6 103 aaKnown RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 HIST1H2AAQ96QV6 131 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 CCDC32Q9BV29 185 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 TM2D1Q9BX74 207 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 C1QTNF6Q9BXI9 259 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PKIBQ9C010 78 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PLGRKTQ9HBL7 147 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 TMEM100Q9NV29 134 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 COMMD3Q9UBI1 195 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 OR5V1Q9UGF6 321 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 N6AMT1Q9Y5N5 214 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 KLF2Q9Y5W3 355 aaPredicted RBP4.66□□□□□ -1.66
VPS41-211ENST00000466017 CFAP47Q6ZTR5 3102 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 HCFC1P51610 2035 aa4.66□□□□□ -1.66
VPS41-211ENST00000466017 PRR14LQ5THK1 2151 aa4.65□□□□□ -1.66
VPS41-211ENST00000466017 ISPDA4D126 451 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 METTL21EPA6NDL7 271 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A10PA6NDY2 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FABP12A6NFH5 140 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 TUBAL3A6NHL2 446 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A20PA6NIJ5 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A8PA6NJQ4 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A7PA6NKC0 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 ZNF850A8MQ14 1090 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A22PA8MWA6 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A12PA8MX19 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A5PA8MXJ8 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A23PA8MXZ1 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 SULT1C2O00338 296 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 NOS1APO75052 506 aaPredicted RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 C1QL1O75973 258 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 PAHP00439 452 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 CD55P08174 381 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 MELTFP08582 738 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 HCKP08631 526 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A15PP0C7V4 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A13PP0C7W8 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A14PP0C7W9 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 FAM90A24PP0C7X0 464 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 SLC2A2P11168 524 aaPredicted RBP4.65□□□□□ -1.67
VPS41-211ENST00000466017 ARSBP15848 533 aa4.65□□□□□ -1.67
VPS41-211ENST00000466017 PMELP40967 661 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms