RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ADAT3Q96EY9 351 aaPredicted RBP17.84■□□□□ 0.45
LIME1-203ENST00000465591 PKIBQ9C010 78 aa17.84■□□□□ 0.45
LIME1-203ENST00000465591 UNKLQ9H9P5 680 aaKnown RBP17.84■□□□□ 0.45
LIME1-203ENST00000465591 POLDIP2Q9Y2S7 368 aa17.84■□□□□ 0.45
LIME1-203ENST00000465591 H0YHG0 523 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 M0R1W7 72 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 SLC16A6O15403 523 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 UBCP0CG48 685 aaKnown RBP17.83■□□□□ 0.44
LIME1-203ENST00000465591 CAPZA1P52907 286 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 ACTC1P68032 377 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 ACTA1P68133 377 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 IL24Q13007 206 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 HCP5Q6MZN7 132 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 LDLRAD3Q86YD5 345 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 FAM185AQ8N0U4 392 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 TMEM86BQ8N661 226 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 OR10AC1Q8NH08 325 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 ADI1Q9BV57 179 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 AMBNQ9NP70 447 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 MTCH1Q9NZJ7 389 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 OR14J1Q9UGF5 321 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 SLC7A11Q9UPY5 501 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 MYRFQ9Y2G1 1151 aa17.83■□□□□ 0.44
LIME1-203ENST00000465591 IGKV1-9A0A0C4DH69 117 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 IER3P46695 156 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 FDX2Q6P4F2 183 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 ZBTB49Q6ZSB9 765 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 C1orf122Q6ZSJ8 110 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 ACBD7Q8N6N7 88 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 RHOXF1Q8NHV9 184 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 SSMEM1Q8WWF3 244 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 PELI1Q96FA3 418 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 DCLRE1BQ9H816 532 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 POMT1Q9Y6A1 747 aa17.82■□□□□ 0.44
LIME1-203ENST00000465591 TRRAPQ9Y4A5 3859 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 TRBV23-1A0A0A0MS06 115 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 J3QLW9 94 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 NPFFO15130 113 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 GATBO75879 557 aaKnown RBP17.81■□□□□ 0.44
LIME1-203ENST00000465591 INMTO95050 263 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 DBTP11182 482 aaKnown RBP17.81■□□□□ 0.44
LIME1-203ENST00000465591 ZNF19P17023 458 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 FUT6P51993 359 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 LHFPL3Q86UP9 236 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 ZNF561Q8N587 486 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 CCDC54Q8NEL0 328 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 OR4M1Q8NGD0 313 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 OR51A4Q8NGJ6 313 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 SLAMF9Q96A28 289 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 C4orf36Q96KX1 117 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 ZNF649Q9BS31 505 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 METTL8Q9H825 291 aaKnown RBP17.81■□□□□ 0.44
LIME1-203ENST00000465591 FAM118AQ9NWS6 357 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 C1RLQ9NZP8 487 aa17.81■□□□□ 0.44
LIME1-203ENST00000465591 LOC100130705A0A1B0GUX0 176 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 SLC1A7O00341 560 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 HTR1AP08908 422 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 SAA4P35542 130 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 ERVFRD-1P60508 538 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 GUCA2AQ02747 115 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 TMEM244Q5VVB8 128 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 TMEM200BQ69YZ2 307 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 SLC25A26Q70HW3 274 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 RNF144BQ7Z419 303 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 KCTD20Q7Z5Y7 419 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 C11orf42Q8N5U0 333 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 APH1BQ8WW43 257 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 C10orf35Q96D05 121 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 ISG20L2Q9H9L3 353 aaKnown RBP17.8■□□□□ 0.44
LIME1-203ENST00000465591 IL36RNQ9UBH0 155 aa17.8■□□□□ 0.44
LIME1-203ENST00000465591 OR4C45A6NMZ5 311 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 KNG1P01042 644 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 TK1P04183 234 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 ISG15P05161 165 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 RPL31P62899 125 aaKnown RBP17.79■□□□□ 0.44
LIME1-203ENST00000465591 ZNF273Q14593 569 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 TAF9Q16594 264 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 TBC1D15Q8TC07 691 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 C17orf50Q8WW18 174 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 PP6455Q8WZ26 134 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 FGGYQ96C11 551 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 BORCS8Q96FH0 119 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 CEP19Q96LK0 163 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 ALG8Q9BVK2 526 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 C8orf4Q9NR00 106 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 ZNRD1Q9P1U0 126 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 FAM96BQ9Y3D0 163 aa17.79■□□□□ 0.44
LIME1-203ENST00000465591 PKD1L1Q8TDX9 2849 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 H0YAE9 185 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 GPR137BO60478 399 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 IGHA1P01876 353 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 CCL3L1P16619 93 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 EEF1B2P24534 225 aaKnown RBP17.78■□□□□ 0.44
LIME1-203ENST00000465591 CCR9P51686 369 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 UBE2E1P51965 193 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 RAG2P55895 527 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 COL10A1Q03692 680 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 GALEQ14376 348 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 SHISA2Q6UWI4 295 aa17.78■□□□□ 0.44
LIME1-203ENST00000465591 MKXQ8IYA7 352 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms