RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 CPT2P23786 658 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 MTCP1P56278 107 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 GMFBP60983 142 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 HOXA4Q00056 320 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-205ENST00000465238 DOC2BQ14184 412 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 MICBQ29980 383 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 Q499Y3 187 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 DCDC5Q6ZRR9 648 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 LHFPL2Q6ZUX7 228 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 ANGPTL5Q86XS5 388 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 C3orf56Q8N813 242 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 OR13C5Q8NGS8 318 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 TMEM106AQ96A25 262 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 PKIBQ9C010 78 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 DNAJB11Q9UBS4 358 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 LRRC42Q9Y546 428 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 DOCK11Q5JSL3 2073 aa14.76□□□□□ -0.05
COL7A1-205ENST00000465238 IGHV3OR15-7A0A075B7D8 119 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 TRBV5-5A0A0J9YX44 114 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 SULT1B1O43704 296 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 SYNGR1O43759 233 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 ALX3O95076 343 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 HCKP08631 526 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 WNT2P09544 360 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 MUC1P15941 1255 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-205ENST00000465238 RAB3AP20336 220 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 GLRA1P23415 457 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 ZFP36P26651 326 aaKnown RBP14.75□□□□□ -0.05
COL7A1-205ENST00000465238 GPR50Q13585 617 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 TBCEQ15813 527 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-205ENST00000465238 TEX36Q5VZQ5 186 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 NLRC3Q7RTR2 1065 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 CALHM1Q8IU99 346 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 SVOPQ8N4V2 548 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 MS4A15Q8N5U1 240 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 UFD1Q92890 307 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 NEIL1Q96FI4 390 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-205ENST00000465238 ISYNA1Q9NPH2 558 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 RASL12Q9NYN1 266 aa14.75□□□□□ -0.05
COL7A1-205ENST00000465238 POLR3KQ9Y2Y1 108 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-205ENST00000465238 IGKV1-27A0A075B6S5 117 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 MAGEB3O15480 346 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 CYB5AP00167 134 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 PLATP00750 562 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 GYPAP02724 150 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 MPZP25189 248 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 RPS11P62280 158 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL7A1-205ENST00000465238 IL24Q13007 206 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 FAM90A1Q86YD7 464 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 POC1AQ8NBT0 407 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 OR8B3Q8NGG8 313 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 THRSPQ92748 146 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 TMIGD2Q96BF3 282 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 C12orf43Q96C57 262 aaKnown RBP14.74□□□□□ -0.05
COL7A1-205ENST00000465238 OR8B2Q96RD0 313 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 WDR13Q9H1Z4 485 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 TAS2R4Q9NYW5 299 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 CKLFQ9UBR5 152 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 MGAM2Q2M2H8 2515 aa14.74□□□□□ -0.05
COL7A1-205ENST00000465238 ZNF879B4DU55 563 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 F5H0A9 414 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-205ENST00000465238 PGA5P0DJD9 388 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 POU3F4P49335 361 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 PPP3R1P63098 170 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 EMX1Q04741 257 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-205ENST00000465238 MLLT11Q13015 90 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ESCO2Q56NI9 601 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 LIPKQ5VXJ0 399 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 LYPD2Q6UXB3 125 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 SLC25A26Q70HW3 274 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ZNF367Q7RTV3 350 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 MKXQ8IYA7 352 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ZDHHC22Q8N966 263 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 SEH1LQ96EE3 360 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ZNF488Q96MN9 340 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 OR14A2Q96R54 314 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 MGLLQ99685 303 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 TMED9Q9BVK6 235 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ACOT13Q9NPJ3 140 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 ESM1Q9NQ30 184 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 MMP26Q9NRE1 261 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 LRCH1Q9Y2L9 728 aa14.73□□□□□ -0.05
COL7A1-205ENST00000465238 A8MXK9 166 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 ADAM20O43506 726 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 NOS1APO75052 506 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-205ENST00000465238 NXPH2O95156 264 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 ACAA1P09110 424 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-205ENST00000465238 MAPK3P27361 379 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-205ENST00000465238 TGFBR2P37173 567 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 PITPNBP48739 271 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 TPBGQ13641 420 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 ARMCX4Q5H9R4 360 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 RBMS3Q6XE24 437 aaKnown RBP14.72□□□□□ -0.05
COL7A1-205ENST00000465238 OR5T2Q8NGG2 359 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 SGMS2Q8NHU3 365 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 C22orf15Q8WYQ4 148 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 CPNE2Q96FN4 548 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-205ENST00000465238 SPACA5Q96QH8 159 aa14.72□□□□□ -0.05
COL7A1-205ENST00000465238 SNTG1Q9NSN8 517 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms