RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 IGHV1-69P01742 117 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 RNASE1P07998 156 aaKnown RBP13.41□□□□□ -0.26
SSNA1-204ENST00000464553 ZNF20P17024 532 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 NDUFB7P17568 137 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 NANOS3P60323 173 aaKnown RBP13.41□□□□□ -0.26
SSNA1-204ENST00000464553 ACTG1P63261 375 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 BLMHQ13867 455 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 CCDC58Q4VC31 144 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 DMRTC1Q5HYR2 192 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 CALHM1Q8IU99 346 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 RDH10Q8IZV5 341 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 TMEM86BQ8N661 226 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 CEP19Q96LK0 163 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
SSNA1-204ENST00000464553 METTL8Q9H825 291 aaKnown RBP13.41□□□□□ -0.26
SSNA1-204ENST00000464553 AMBNQ9NP70 447 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 AASSQ9UDR5 926 aa13.41□□□□□ -0.26
SSNA1-204ENST00000464553 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
SSNA1-204ENST00000464553 A0A1B0GW55 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 A6NIN4 97 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 H0YAE9 185 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 CASQ2O14958 399 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 WBP4O75554 376 aaKnown RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 RGS9O75916 674 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 SFTPBP07988 381 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 CHRM2P08172 466 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L2P0CJ85 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L3P0CJ86 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L4P0CJ87 422 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L5P0CJ88 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L6P0CJ89 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L7P0CJ90 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ATF1P18846 271 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ELF3P78545 371 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 FOXL1Q12952 345 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 MED21Q13503 144 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 RCN1Q15293 331 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 Q6YL49 198 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 LHFPL2Q6ZUX7 228 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ANGPTL5Q86XS5 388 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 CD177Q8N6Q3 437 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ZNRF1Q8ND25 227 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 OR5D14Q8NGL3 314 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 H1FXQ92522 213 aaKnown RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 FGGYQ96C11 551 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 ADAT3Q96EY9 351 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-204ENST00000464553 COMMD4Q9H0A8 199 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DCLRE1BQ9H816 532 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 DUX4Q9UBX2 424 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 POMT1Q9Y6A1 747 aa13.4□□□□□ -0.26
SSNA1-204ENST00000464553 hCG_1809904A0A1W2PP81 198 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 A0A1W2PPE2 198 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 A0A1W2PR64 198 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 A0A1W2PRV1 198 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 HKR1P10072 659 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 MTCP1P56278 107 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 SLC9A3R2Q15599 337 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 NCR3LG1Q68D85 454 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 TMPRSS11AQ6ZMR5 421 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 SERPINA12Q8IW75 414 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 PARP16Q8N5Y8 322 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 TMEM185AQ8NFB2 350 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 OR5D13Q8NGL4 314 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 OR5AK2Q8NH90 309 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 TRMT10AQ8TBZ6 339 aaKnown RBP13.39□□□□□ -0.27
SSNA1-204ENST00000464553 LHX4Q969G2 390 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 VCXQ9H320 206 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 MTCH1Q9NZJ7 389 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
SSNA1-204ENST00000464553 STAB1Q9NY15 2570 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 IGKV1-27A0A075B6S5 117 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 LIMS3P0CW19 117 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 LIMS4P0CW20 117 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 SELLP14151 372 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 UBE2E1P51965 193 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 RPL15P61313 204 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 LRRC36Q1X8D7 754 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 OGFRL1Q5TC84 451 aaPredicted RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 RPL22L1Q6P5R6 122 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 FIP1L1Q6UN15 594 aaKnown RBP13.38□□□□□ -0.27
SSNA1-204ENST00000464553 BRD3OSQ6XYD6 125 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 SAXO1Q8IYX7 474 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 Q8N7P7 452 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 OR13C3Q8NGS6 347 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 SSMEM1Q8WWF3 244 aa13.38□□□□□ -0.27
SSNA1-204ENST00000464553 CYGBQ8WWM9 190 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms