RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SLC38A1Q9H2H9 487 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 SDHAF2Q9NX18 166 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 AK9Q5TCS8 1911 aa2.16□□□□□ -2.06
CLK1-208ENST00000464454 SETD1AO15047 1707 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 SLC5A10A0PJK1 596 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 C9JQL5 133 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 K7EN84 100 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 NDUFS8O00217 210 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 UPK1AO00322 258 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 RNF113AO15541 343 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 VAPBO95292 243 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 IGHV1-46P01743 117 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 S100A9P06702 114 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 SNRPAP09012 282 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 CCNOP22674 350 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 HTR2BP41595 481 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 NUDT2P50583 147 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 ATP5J2P56134 94 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 OR12D2P58182 307 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 IGFBP7Q16270 282 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 KCTD16Q68DU8 428 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 APOBEC3HQ6NTF7 200 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 CLEC19AQ6UXS0 136 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 FAM231DQ6ZW35 169 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 TRMT10CQ7L0Y3 403 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 ITPRIPQ8IWB1 547 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 LRRC8AQ8IWT6 810 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 CYP4Z2PQ8N1L4 340 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 ZNF680Q8NEM1 530 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 FAM57AQ8TBR7 257 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 CACNG8Q8WXS5 425 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 CDKL2Q92772 493 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 LRRC39Q96DD0 335 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 SPACA5Q96QH8 159 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 ZNF649Q9BS31 505 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 PRORYQ9H606 182 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 ABCB9Q9NP78 766 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 C12orf4Q9NQ89 552 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 DAZ1Q9NQZ3 744 aaKnown RBP2.15□□□□□ -2.07
CLK1-208ENST00000464454 RBM22Q9NW64 420 aaKnown RBP eCLIP2.15□□□□□ -2.07
CLK1-208ENST00000464454 ANXA10Q9UJ72 324 aa2.15□□□□□ -2.07
CLK1-208ENST00000464454 GOLGA6L4A6NEF3 574 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 CLDN34H7C241 214 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SPOPO43791 374 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 NRASP01111 189 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 HRASP01112 189 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 KRASP01116 189 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 IGKV1D-16P01601 117 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 PFN1P07737 140 aaKnown RBP2.14□□□□□ -2.07
CLK1-208ENST00000464454 DSTNP60981 165 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 RPS11P62280 158 aaKnown RBP eCLIP2.14□□□□□ -2.07
CLK1-208ENST00000464454 XIAPP98170 497 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 MEF2CQ06413 473 aaPredicted RBP2.14□□□□□ -2.07
CLK1-208ENST00000464454 IL15RAQ13261 267 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 ATP6AP1LQ52LC2 224 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 ZFAND6Q6FIF0 208 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 UGT2A3Q6UWM9 527 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 PDCL2Q8N4E4 241 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 CCNYL1Q8N7R7 359 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 LRRC20Q8TCA0 184 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 LGALS14Q8TCE9 139 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 DOK4Q8TEW6 326 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 GLT1D1Q96MS3 346 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 VAT1Q99536 393 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SEC22CQ9BRL7 303 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SIKE1Q9BRV8 207 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SND1-IT1Q9HBX3 110 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 PARP11Q9NR21 331 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 INIPQ9NRY2 104 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 DDIT4Q9NX09 232 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 STMN3Q9NZ72 180 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 STK38LQ9Y2H1 464 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SLC22A7Q9Y694 548 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 ADAMTSL3P82987 1691 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 DYSFO75923 2080 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 SYNRGQ9UMZ2 1314 aa2.14□□□□□ -2.07
CLK1-208ENST00000464454 RPRD2Q5VT52 1461 aaKnown RBP2.14□□□□□ -2.07
CLK1-208ENST00000464454 KIR2DS1A0A191URI9 304 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 RAB19A4D1S5 217 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 ZMPSTE24O75844 475 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 SC5DO75845 299 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 IVLP07476 585 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 OR5AC1P0C628 307 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 SEC11BP0C7V7 166 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 TGFBR1P36897 503 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 DNASE1L1P49184 302 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 TUFMP49411 452 aaKnown RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 SLC18A1P54219 525 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 BIKQ13323 160 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 FAM53BQ14153 422 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 ELOCQ15369 112 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 LINC00303Q3SY05 128 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 TMEM69Q5SWH9 247 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 MRPL2Q5T653 305 aaKnown RBP2.13□□□□□ -2.07
CLK1-208ENST00000464454 TMEM136Q6ZRR5 245 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 CALHM3Q86XJ0 350 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 ATPAF2Q8N5M1 289 aa2.13□□□□□ -2.07
CLK1-208ENST00000464454 ZDHHC22Q8N966 263 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms