RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MOGAT3Q86VF5 341 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 GCSAMQ8N6F7 178 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 LGALS14Q8TCE9 139 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-202ENST00000463060 AP3S1Q92572 193 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 SLAMF9Q96A28 289 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 VRK1Q99986 396 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-202ENST00000463060 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 METTL9Q9H1A3 318 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 RHOFQ9HBH0 211 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 DECR2Q9NUI1 292 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 POLDIP2Q9Y2S7 368 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 DYSFO75923 2080 aa12.09□□□□□ -0.47
COL6A1-202ENST00000463060 A0A1W2PP11 408 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 SRRM5B3KS81 715 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF780AO75290 641 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-202ENST00000463060 RAB6AP20340 208 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 BCL3P20749 454 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 CDKN1AP38936 164 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 EFNB2P52799 333 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 MRPS11P82912 194 aaKnown RBP12.08□□□□□ -0.48
COL6A1-202ENST00000463060 GPR176Q14439 515 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 OR51T1Q8NGJ9 327 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 OR10K1Q8NGX5 313 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 KCNG3Q8TAE7 436 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 MRPS24Q96EL2 167 aaKnown RBP12.08□□□□□ -0.48
COL6A1-202ENST00000463060 CEP19Q96LK0 163 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF488Q96MN9 340 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 SMURF1Q9HCE7 757 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 HMG20AQ9NP66 347 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF701Q9NV72 531 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-202ENST00000463060 DCAF16Q9NXF7 216 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 COMMD3Q9UBI1 195 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 CACNG2Q9Y698 323 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
COL6A1-202ENST00000463060 USF3Q68DE3 2245 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 A6NLC8 198 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 AKR7A2O43488 359 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 CDC14BO60729 498 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 NDUFS7O75251 213 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 RP2O75695 350 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 CLPXO76031 633 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-202ENST00000463060 PAX1P15863 534 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 COL8A2P25067 703 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-202ENST00000463060 RSU1Q15404 277 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 SLC22A6Q4U2R8 563 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 NHLRC3Q5JS37 347 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 Q8IYB0 196 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 FAM89BQ8N5H3 189 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 NRGNQ92686 78 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 YIPF5Q969M3 257 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 LPAR5Q9H1C0 372 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 ABCG5Q9H222 651 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 RBFOX1Q9NWB1 397 aaKnown RBP12.07□□□□□ -0.48
COL6A1-202ENST00000463060 RNF7Q9UBF6 113 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 RAB22AQ9UL26 194 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 SPG11Q96JI7 2443 aa12.07□□□□□ -0.48
COL6A1-202ENST00000463060 APCP25054 2843 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 IGHV1-69-2A0A0G2JMI3 117 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 WNT9BO14905 357 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 TPD52L2O43399 206 aaKnown RBP12.06□□□□□ -0.48
COL6A1-202ENST00000463060 HTR3BO95264 441 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 CYB5AP00167 134 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 MGMTP16455 207 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 EGR1P18146 543 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 EFNA4P52798 201 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 FGF12P61328 243 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 RPS27AP62979 156 aaKnown RBP12.06□□□□□ -0.48
COL6A1-202ENST00000463060 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 FAM58AQ8N1B3 248 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 OSR2Q8N2R0 312 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 OR6Q1Q8NGQ2 317 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 LRRC29Q8WV35 223 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 Q96M66 194 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 WDFY2Q96P53 400 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 S100A13Q99584 98 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 CCL19Q99731 98 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 TM2D1Q9BX74 207 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 CST11Q9H112 138 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 WDR13Q9H1Z4 485 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 BANF2Q9H503 90 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 SEBOXQ9HB31 216 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms