RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 TMEM212A6NML5 194 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 RFPL4AL1F8VTS6 287 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 H0YAE9 185 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 TRIM77I1YAP6 450 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 NOS1APO75052 506 aaPredicted RBP15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 CCDC159P0C7I6 412 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 ATF1P18846 271 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 MYL12AP19105 171 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 AZGP1P25311 298 aaKnown RBP15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 RBP2P50120 134 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 ETV1P50549 477 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 ATP1B3P54709 279 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 BRD3OSQ6XYD6 125 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 UTS2BQ765I0 119 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 HAVCR2Q8TDQ0 301 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 TSEN15Q8WW01 171 aaKnown RBP15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 SLAMF9Q96A28 289 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 TBX15Q96SF7 602 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 NRIP2Q9BQI9 281 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 JAM3Q9BX67 310 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 SIRPDQ9H106 197 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 HSPE1-MOB4S4R3N1 261 aa15.3■□□□□ 0.04
CDKN1A-206ENST00000462537 TRBV2A0A0J9YWF9 115 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 A0A1W2PQ09 198 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 SLC1A7O00341 560 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 RPSAP08865 295 aaKnown RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 GNAO1P09471 354 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 MMP9P14780 707 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 PRKACBP22694 351 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 POU3F4P49335 361 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CEBPDP49716 269 aaPredicted RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 MTCP1P56278 107 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CAV3P56539 151 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 SLC34A1Q06495 639 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 MED21Q13503 144 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 PDCD1Q15116 288 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 TMPRSS11AQ6ZMR5 421 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 SLC25A26Q70HW3 274 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CD177Q8N6Q3 437 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 LY6G5BQ8NDX9 201 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 ZFAND2BQ8WV99 257 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 LHX4Q969G2 390 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 SDSLQ96GA7 329 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CEP19Q96LK0 163 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 ELL3Q9HB65 397 aaPredicted RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CHCHD3Q9NX63 227 aaKnown RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 DIMT1Q9UNQ2 313 aaKnown RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 CAB39Q9Y376 341 aaPredicted RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 EXOSC1Q9Y3B2 195 aaKnown RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 MAB21L2Q9Y586 359 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 SOX21Q9Y651 276 aaPredicted RBP15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 KPTNQ9Y664 436 aa15.29■□□□□ 0.04
CDKN1A-206ENST00000462537 IGKV1-9A0A0C4DH69 117 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 ZFPL1O95159 310 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 CYB5AP00167 134 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 PRDX2P32119 198 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 ACTG1P63261 375 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 BAMBIQ13145 260 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 OR2G6Q5TZ20 316 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 RUSC1-AS1Q66K80 236 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 LHFPL2Q6ZUX7 228 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 VMO1Q7Z5L0 202 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 ZNF561Q8N587 486 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 DNAAF1Q8NEP3 725 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 OR13C9Q8NGT0 318 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 OPALINQ96PE5 141 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 HES4Q9HCC6 221 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 ESM1Q9NQ30 184 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 DHDHQ9UQ10 334 aa15.28■□□□□ 0.04
CDKN1A-206ENST00000462537 CENPVL3A0A0U1RRI6 287 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 BPIFB3P59826 476 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 C9orf139Q6ZV77 190 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 PDZD9Q8IXQ8 264 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 MKXQ8IYA7 352 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 FAM185AQ8N0U4 392 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 ZDHHC22Q8N966 263 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 C8orf46Q8TAG6 207 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 GGHQ92820 318 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 SPSB1Q96BD6 273 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 DUX5Q96PT3 197 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 ZCCHC4Q9H5U6 513 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 NEK6Q9HC98 313 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 MTCH1Q9NZJ7 389 aa15.27■□□□□ 0.04
CDKN1A-206ENST00000462537 SPRY1O43609 319 aaPredicted RBP15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 KNG1P01042 644 aa15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 ERVK11-1P61568 191 aa15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 UBA52P62987 128 aaKnown RBP15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 ST3GAL4Q11206 333 aa15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 RPL22L1Q6P5R6 122 aaKnown RBP15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 KIR3DL3Q8N743 410 aa15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 GATAD2BQ8WXI9 593 aa15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 EMG1Q92979 244 aaKnown RBP15.26■□□□□ 0.03
CDKN1A-206ENST00000462537 ZDHHC16Q969W1 377 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms