RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CHD3Q12873 2000 aaKnown RBP11.38□□□□□ -0.59
PBRM1-219ENST00000462207 FBN2P35556 2912 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 LRBAP50851 2863 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 CDC14BO60729 498 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 SFTPBP07988 381 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 BCL3P20749 454 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 SSTR2P30874 369 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 GATA4P43694 442 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 MZT1Q08AG7 82 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 IL24Q13007 206 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 RIN1Q13671 783 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 TESK1Q15569 626 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 PCGF3Q3KNV8 242 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 SLC22A6Q4U2R8 563 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 TMEM104Q8NE00 496 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 OR51F2Q8NH61 342 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 DSCAMO60469 2012 aa11.38□□□□□ -0.59
PBRM1-219ENST00000462207 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 H7C417 338 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 WNT9BO14905 357 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 AKR7A2O43488 359 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 ARSBP15848 533 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 EGR1P18146 543 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 SERPINA2P20848 420 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 CD40LGP29965 261 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 EFNB2P52799 333 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 QRFPP83859 136 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 AKAP6Q13023 2319 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 UNC119Q13432 240 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 CADM3Q8N126 398 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 MCFD2Q8NI22 146 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 LRRC29Q8WV35 223 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 HPS1Q92902 700 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 SEH1LQ96EE3 360 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 GAL3ST1Q99999 423 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 EGLN1Q9GZT9 426 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 BANF2Q9H503 90 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 FN3KRPQ9HA64 309 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 RBFOX1Q9NWB1 397 aaKnown RBP11.37□□□□□ -0.59
PBRM1-219ENST00000462207 IL36RNQ9UBH0 155 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 COMMD3Q9UBI1 195 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 TMEM272A0A1B0GTI8 110 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 OVOL3O00110 214 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 BPNT1O95861 308 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 CYB5R3P00387 301 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-219ENST00000462207 RSU1Q15404 277 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 C2orf76Q3KRA6 126 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 ZNF404Q494X3 552 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 FAM201AQ5SY85 155 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 ASCL4Q6XD76 172 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 BOLLQ8N9W6 283 aaKnown RBP11.37□□□□□ -0.59
PBRM1-219ENST00000462207 C19orf18Q8NEA5 215 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 OR6Q1Q8NGQ2 317 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 CEP19Q96LK0 163 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 C6orf62Q9GZU0 229 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-219ENST00000462207 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 WDR13Q9H1Z4 485 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 PPP1R3CQ9UQK1 317 aa11.37□□□□□ -0.59
PBRM1-219ENST00000462207 CTDSP2O14595 271 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 LDLRAD4O15165 306 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 CRTAPO75718 401 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-219ENST00000462207 KDM4BO94953 1096 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 HTR3BO95264 441 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 PGA5P0DJD9 388 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 BMP4P12644 408 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 TNFRSF1AP19438 455 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 SNU13P55769 128 aaKnown RBP11.36□□□□□ -0.59
PBRM1-219ENST00000462207 BIVMQ86UB2 503 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 MKXQ8IYA7 352 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 ZSCAN4Q8NAM6 433 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-219ENST00000462207 POC1AQ8NBT0 407 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 PXT1Q8NFP0 134 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 YIPF5Q969M3 257 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 SLC25A38Q96DW6 304 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 S100A13Q99584 98 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 NRIP2Q9BQI9 281 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 NXF2Q9GZY0 626 aaKnown RBP11.36□□□□□ -0.59
PBRM1-219ENST00000462207 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 ZNF581Q9P0T4 197 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 POLDIP2Q9Y2S7 368 aa11.36□□□□□ -0.59
PBRM1-219ENST00000462207 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 TMEM14DPA8MWL7 114 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 TRAPPC2LH3BP13 241 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 HPGDSO60760 199 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 ZNF205O95201 554 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 MPIG6BO95866 241 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 CYB5AP00167 134 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 CD80P33681 288 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 LAX1Q8IWV1 398 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 SAXO1Q8IYX7 474 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 GCSAMQ8N6F7 178 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 AP3S1Q92572 193 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 CCL17Q92583 94 aa11.35□□□□□ -0.59
PBRM1-219ENST00000462207 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
PBRM1-219ENST00000462207 CYYR1Q96J86 154 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms