RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ADAT3Q96EY9 351 aaPredicted RBP12.71□□□□□ -0.37
VARS-219ENST00000461328 WDFY2Q96P53 400 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 PKIBQ9C010 78 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 CNTD2Q9H8S5 307 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 OR14J1Q9UGF5 321 aa12.71□□□□□ -0.37
VARS-219ENST00000461328 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 RFPL4AA6NLU0 287 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 OR4C45A6NMZ5 311 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 RFPL4AL1F8VTS6 287 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 SLC1A7O00341 560 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 INMTO95050 263 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 MPZP25189 248 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 CAPGP40121 348 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 POU3F4P49335 361 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 ATP1B3P54709 279 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 BPIFB3P59826 476 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 IL24Q13007 206 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 CALHM1Q8IU99 346 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
VARS-219ENST00000461328 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 OR10AC1Q8NH08 325 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 TSEN15Q8WW01 171 aaKnown RBP12.7□□□□□ -0.38
VARS-219ENST00000461328 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 SLC25A28Q96A46 364 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 C1orf147Q96MC9 270 aaPredicted RBP12.7□□□□□ -0.38
VARS-219ENST00000461328 TBX15Q96SF7 602 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
VARS-219ENST00000461328 ELL3Q9HB65 397 aaPredicted RBP12.7□□□□□ -0.38
VARS-219ENST00000461328 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
VARS-219ENST00000461328 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 CASQ2O14958 399 aaPredicted RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 CYB5AP00167 134 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 MMP9P14780 707 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 ATF1P18846 271 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 PRKACBP22694 351 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 AZGP1P25311 298 aaKnown RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 DCKP27707 260 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 CEBPDP49716 269 aaPredicted RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 CAV3P56539 151 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 ADARB1P78563 741 aaKnown RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 IL18R1Q13478 541 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 MED21Q13503 144 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 PDCD1Q15116 288 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 SLC9A3R2Q15599 337 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 DEFB112Q30KQ8 113 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 TMPRSS11AQ6ZMR5 421 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 SLC25A26Q70HW3 274 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 OR51A4Q8NGJ6 313 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 HAVCR2Q8TDQ0 301 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 LHX4Q969G2 390 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 SLAMF9Q96A28 289 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 CEP19Q96LK0 163 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 SIRPDQ9H106 197 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 DCLRE1BQ9H816 532 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 NEK6Q9HC98 313 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 FGF20Q9NP95 211 aaPredicted RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 CHCHD3Q9NX63 227 aaKnown RBP12.69□□□□□ -0.38
VARS-219ENST00000461328 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
VARS-219ENST00000461328 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 CLDN34H7C241 214 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 NOS1APO75052 506 aaPredicted RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 RNASE1P07998 156 aaKnown RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 HKR1P10072 659 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 PRDX2P32119 198 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 RBP2P50120 134 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 MTCP1P56278 107 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 FOXL1Q12952 345 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 AWAT1Q58HT5 328 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 FIP1L1Q6UN15 594 aaKnown RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 LHFPL2Q6ZUX7 228 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 EGFL6Q8IUX8 553 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 PDZD9Q8IXQ8 264 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 ZNF561Q8N587 486 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 LY6G5BQ8NDX9 201 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 DNAAF1Q8NEP3 725 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 OR13C9Q8NGT0 318 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 GATAD2BQ8WXI9 593 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 EMG1Q92979 244 aaKnown RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 SPSB1Q96BD6 273 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 SDSLQ96GA7 329 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 OPALINQ96PE5 141 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
VARS-219ENST00000461328 MAB21L2Q9Y586 359 aa12.68□□□□□ -0.38
VARS-219ENST00000461328 ANK2Q01484 3957 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 E9PI62 339 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 H0YAE9 185 aa12.67□□□□□ -0.38
VARS-219ENST00000461328 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
VARS-219ENST00000461328 ZFPL1O95159 310 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms