RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 C21orf58P58505 322 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 IZUMO4Q1ZYL8 232 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 PRSS54Q6PEW0 395 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 C20orf196Q8IYI0 205 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR1B1Q8NGR6 318 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR2T10Q8NGZ9 312 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 ZNF707Q96C28 371 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-205ENST00000461221 TP53RKQ96S44 253 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 SLC25A33Q9BSK2 321 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 LPAR3Q9UBY5 353 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM272A0A1B0GTI8 110 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 MFNGO00587 321 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 P01737 135 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 ASCL1P50553 236 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 WFDC5Q8TCV5 224 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 OR2D2Q9H210 308 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 SLC25A22Q9H936 323 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 CA10Q9NS85 328 aa8.04□□□□□ -1.12
BRCA1-205ENST00000461221 H0Y8X5 98 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 AP4M1O00189 453 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 GAMTQ14353 236 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 KISS1Q15726 138 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 C11orf91Q3C1V1 193 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 SP6Q3SY56 376 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM215Q68D42 235 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 CCDC190Q86UF4 302 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 UBALD2Q8IYN6 164 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 DUSP18Q8NEJ0 188 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 OR10G8Q8NGN5 311 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 GPR87Q9BY21 358 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 RAB1BQ9H0U4 201 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 LTN1O94822 1766 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 C9orf170A2RU37 121 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 KLF7O75840 302 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ORM2P19652 201 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 OR3A4PP47883 348 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 UQCRFS1P47985 274 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TNFAIP6P98066 277 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 AGERQ15109 404 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 FAM24BQ8N5W8 94 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ARHGAP5-AS1Q96IT6 56 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 LINC00615Q96LM1 132 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 CXXC4Q9H2H0 198 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 MON2Q7Z3U7 1717 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 A0A1W2PPC4 97 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 MFSD2BA6NFX1 497 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ZNF253O75346 499 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 SMAD4Q13485 552 aaKnown RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 C12orf73Q69YU5 71 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ABLIM2Q6H8Q1 611 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 BPIFA4PQ86YQ2 179 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 KTI12Q96EK9 354 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 GABRG3Q99928 467 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 LRRC37A3O60309 1634 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 FMN2Q9NZ56 1722 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 M0R3E3 92 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 PDCD6O75340 191 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 CD1BP29016 333 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 G6PCP35575 357 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 PTGFRP43088 359 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ADIPOQQ15848 244 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TNXAQ16473 311 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 DEGS2Q6QHC5 323 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TMEM108Q6UXF1 575 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 CXorf67Q86X51 503 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 LRRC29Q8WV35 223 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 RAB1CQ92928 201 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 C20orf141Q9NUB4 165 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 DOK5Q9P104 306 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 RBFOX3A6NFN3 312 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 DEFB108AA8MXU0 73 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 HIST1H1EP10412 219 aaKnown RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 KLF3P57682 345 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TRA2AQ13595 282 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCA1-205ENST00000461221 CD226Q15762 336 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 HLA-BQ31612 363 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 AMMECR1LQ6DCA0 310 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 TGIF2LYQ8IUE0 185 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 ZNF547Q8IVP9 402 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 OR2A5Q96R48 311 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 C1RLQ9NZP8 487 aa8.03□□□□□ -1.12
BRCA1-205ENST00000461221 IFT172Q9UG01 1749 aa8.02□□□□□ -1.12
BRCA1-205ENST00000461221 OR5B21A6NL26 309 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 DNPH1O43598 174 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 GSTZ1O43708 216 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-205ENST00000461221 EPPINO95925 133 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 RPLP1P05386 114 aaKnown RBP8.02□□□□□ -1.13
BRCA1-205ENST00000461221 CSN3P07498 182 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 ZNF83P51522 516 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 RAB32Q13637 225 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 CST9Q5W186 159 aa8.02□□□□□ -1.13
BRCA1-205ENST00000461221 PTOV1Q86YD1 416 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms