RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CASC3O15234 703 aaKnown RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 AKR7A2O43488 359 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 CDC40O60508 579 aaKnown RBP eCLIP1.86□□□□□ -2.11
RFC4-211ENST00000460408 GLSO94925 669 aaPredicted RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 POLR2MP0CAP2 368 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 NDUFA8P51970 172 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 TAS2R31P59538 309 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 SPAG1Q07617 926 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 RBMY1FQ15415 496 aaKnown RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 WDR82Q6UXN9 313 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 TMCO2Q7Z6W1 182 aaPredicted RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 HMGN2P46Q86SG4 172 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 VKORC1L1Q8N0U8 176 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 GPX8Q8TED1 209 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 SGTBQ96EQ0 304 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 C9orf72Q96LT7 481 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 RBBP8Q99708 897 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 UQCC2Q9BRT2 126 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 TRIM4Q9C037 500 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 C1orf198Q9H425 327 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 PIGUQ9H490 435 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 NCOR1P1Q9H4R4 102 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 MYOZ1Q9NP98 299 aaPredicted RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 RRAGDQ9NQL2 400 aaPredicted RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 DDX18Q9NVP1 670 aaKnown RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 RABL2AQ9UBK7 228 aaPredicted RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 YARS2Q9Y2Z4 477 aaKnown RBP1.86□□□□□ -2.11
RFC4-211ENST00000460408 SIGLEC9Q9Y336 463 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 S4R3C0 116 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 TSC2P49815 1807 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 PCM1Q15154 2024 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 TTC41PQ6P2S7 1318 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 NBPF19A0A087WUL8 3843 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 RP1L1Q8IWN7 2480 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 CACNA1EQ15878 2313 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CENPEQ02224 2701 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 ITPR2Q14571 2701 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 NBASA2RRP1 2371 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 ZNF236Q9UL36 1845 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 IGKV1-27A0A075B6S5 117 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TRAV19A0A0A6YYK7 116 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TRAV40A0A0B4J280 105 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 GOLGA6L7A0A1B0GV03 622 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 A0A1W2PQ67 120 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 A0A1W2PRD5 423 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 NCF1BA6NI72 391 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 ZNF850A8MQ14 1090 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 NCF1CA8MVU1 366 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 ZNF99A8MXY4 864 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 ANKRD65E5RJM6 399 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 SIVA1O15304 175 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CHST10O43529 356 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 SLC16A7O60669 478 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 RCBTB2O95199 551 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 IGLV3-25P01717 112 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 IGHV3-11P01762 117 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 GLAP06280 429 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 STAG3L3P0CL85 134 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CD37P11049 281 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TUBG1P23258 451 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CD82P27701 267 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 POLR2IP36954 125 aaKnown RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 MYCNOSP40205 109 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 MAGEA1P43355 309 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 PPICP45877 212 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 RAB7AP51149 207 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CACNG7P62955 275 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 GABRA6Q16445 453 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 ZNF829Q3KNS6 432 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 H3F3CQ6NXT2 135 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 IGFL1Q6UW32 110 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 RNF182Q8N6D2 247 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 BBOF1Q8ND07 529 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 C19orf18Q8NEA5 215 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 DEFB124Q8NES8 71 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 RAB1CQ92928 201 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 PEX13Q92968 403 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 SLC25A46Q96AG3 418 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 HAUS1Q96CS2 278 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 LINC00477Q96M19 166 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 DOK1Q99704 481 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TIMM29Q9BSF4 260 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TMEM243Q9BU79 118 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CALN1Q9BXU9 219 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 POMKQ9H5K3 350 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 PRORYQ9H606 182 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 C8orf33Q9H7E9 229 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 PRSS16Q9NQE7 514 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 TUBG2Q9NRH3 451 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 RGS18Q9NS28 235 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 MRPL22Q9NWU5 206 aaKnown RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 MARCOQ9UEW3 520 aaPredicted RBP1.85□□□□□ -2.11
RFC4-211ENST00000460408 UBIAD1Q9Y5Z9 338 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 DOCK1Q14185 1865 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CACNA1DQ01668 2161 aa1.85□□□□□ -2.11
RFC4-211ENST00000460408 CCDC168Q8NDH2 2452 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 IGLV3-12A0A075B6K2 115 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 330.2 ms