RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MRPS18AQ9NVS2 196 aaKnown RBP18.94■□□□□ 0.62
PTPN4-208ENST00000460289 MYRFQ9Y2G1 1151 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 A0A1W2PQ09 198 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 IGHA1P01876 353 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 RPSAP08865 295 aaKnown RBP18.93■□□□□ 0.62
PTPN4-208ENST00000460289 CAPZA1P52907 286 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 MRPL28Q13084 256 aaKnown RBP18.93■□□□□ 0.62
PTPN4-208ENST00000460289 LPCAT4Q643R3 524 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 RUSC1-AS1Q66K80 236 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 METAP1DQ6UB28 335 aaPredicted RBP18.93■□□□□ 0.62
PTPN4-208ENST00000460289 NPRL2Q8WTW4 380 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 HES4Q9HCC6 221 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 HHLA2Q9UM44 414 aa18.93■□□□□ 0.62
PTPN4-208ENST00000460289 TRBV23-1A0A0A0MS06 115 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 ZNF20P17024 532 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 ERVK11-1P61568 191 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 ALKBH1Q13686 389 aaKnown RBP18.92■□□□□ 0.62
PTPN4-208ENST00000460289 BLMHQ13867 455 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 CD177Q8N6Q3 437 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 PACRGLQ8N7B6 248 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 DNAAF1Q8NEP3 725 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 FGGYQ96C11 551 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 ERVK13-1Q9NX77 482 aa18.92■□□□□ 0.62
PTPN4-208ENST00000460289 MDFIC2A0A1B0GVS7 189 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 M0R1W7 72 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 HKR1P10072 659 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 RBP2P50120 134 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 ATP1B3P54709 279 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 GUCA2AQ02747 115 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 FOXL1Q12952 345 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 LRRC36Q1X8D7 754 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 TTC23Q5W5X9 447 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 Q6YL49 198 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 UTS2BQ765I0 119 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 ZNF676Q8N7Q3 588 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 C3orf56Q8N813 242 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 HAVCR2Q8TDQ0 301 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 APH1BQ8WW43 257 aa18.91■□□□□ 0.62
PTPN4-208ENST00000460289 ADAT3Q96EY9 351 aaPredicted RBP18.91■□□□□ 0.62
PTPN4-208ENST00000460289 IGKV1-27A0A075B6S5 117 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 OR4C45A6NMZ5 311 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 HOXA3O43365 443 aaPredicted RBP18.9■□□□□ 0.62
PTPN4-208ENST00000460289 KNG1P01042 644 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 PRKACBP22694 351 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 Q8N7P7 452 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 OR52I1Q8NGK6 324 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 CEP19Q96LK0 163 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 METTL8Q9H825 291 aaKnown RBP18.9■□□□□ 0.62
PTPN4-208ENST00000460289 ISG20L2Q9H9L3 353 aaKnown RBP18.9■□□□□ 0.62
PTPN4-208ENST00000460289 SIRT7Q9NRC8 400 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 MTCH1Q9NZJ7 389 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 OR14J1Q9UGF5 321 aa18.9■□□□□ 0.62
PTPN4-208ENST00000460289 A0A1W2PPH5 198 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 CYB5AP00167 134 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 OCM2P0CE71 109 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 OCMP0CE72 109 aaPredicted RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 ATF1P18846 271 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 EEF1B2P24534 225 aaKnown RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 CFPP27918 469 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 GBX2P52951 348 aaPredicted RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 MTCP1P56278 107 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 ZNF691Q5VV52 312 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 C16orf87Q6PH81 154 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 SLC25A26Q70HW3 274 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 PDZD9Q8IXQ8 264 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 MKXQ8IYA7 352 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 BATF2Q8N1L9 274 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 TMEM86BQ8N661 226 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 OR13C3Q8NGS6 347 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 TBC1D15Q8TC07 691 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 SPSB1Q96BD6 273 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 ZNF649Q9BS31 505 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 FAM234AQ9H0X4 552 aa18.89■□□□□ 0.61
PTPN4-208ENST00000460289 UNKLQ9H9P5 680 aaKnown RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 ELL3Q9HB65 397 aaPredicted RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 CAB39Q9Y376 341 aaPredicted RBP18.89■□□□□ 0.61
PTPN4-208ENST00000460289 WBP4O75554 376 aaKnown RBP18.88■□□□□ 0.61
PTPN4-208ENST00000460289 RCN1Q15293 331 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 NCR3LG1Q68D85 454 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 LHFPL2Q6ZUX7 228 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 Q8IYB0 196 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 FAM185AQ8N0U4 392 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 CYGBQ8WWM9 190 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 SLAMF9Q96A28 289 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 JAM3Q9BX67 310 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 NEK6Q9HC98 313 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 FGF20Q9NP95 211 aaPredicted RBP18.88■□□□□ 0.61
PTPN4-208ENST00000460289 FAM96BQ9Y3D0 163 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 POMT1Q9Y6A1 747 aa18.88■□□□□ 0.61
PTPN4-208ENST00000460289 IGKV1-9A0A0C4DH69 117 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 IRGMA1A4Y4 181 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 TMEM212A6NML5 194 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 H0YAE9 185 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 CHRM2P08172 466 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 CCDC159P0C7I6 412 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 AZGP1P25311 298 aaKnown RBP18.87■□□□□ 0.61
PTPN4-208ENST00000460289 DCKP27707 260 aa18.87■□□□□ 0.61
PTPN4-208ENST00000460289 CEBPDP49716 269 aaPredicted RBP18.87■□□□□ 0.61
PTPN4-208ENST00000460289 RPL31P62899 125 aaKnown RBP18.87■□□□□ 0.61
PTPN4-208ENST00000460289 ANK2Q01484 3957 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms