RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZSCAN4Q8NAM6 433 aaPredicted RBP8.2□□□□□ -1.1
HDLBP-228ENST00000459788 BEND2Q8NDZ0 799 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 TMEM185AQ8NFB2 350 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 RORBQ92753 470 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 MEGF9Q9H1U4 602 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 RIBC2Q9H4K1 309 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 GTF2A1LQ9UNN4 478 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 SOX21Q9Y651 276 aaPredicted RBP8.2□□□□□ -1.1
HDLBP-228ENST00000459788 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 KIAA2026Q5HYC2 2103 aa8.2□□□□□ -1.1
HDLBP-228ENST00000459788 VWFP04275 2813 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 RFPL4AA6NLU0 287 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 RFPL4AL1F8VTS6 287 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 H0YAE9 185 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 J3QRE1 110 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 K7N7A8 449 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 TSPAN9O75954 239 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 PAHP00439 452 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 CHRM2P08172 466 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 MDKP21741 143 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-228ENST00000459788 ACTA2P62736 377 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 RPL31P62899 125 aaKnown RBP8.19□□□□□ -1.1
HDLBP-228ENST00000459788 ACTG2P63267 376 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 C17orf107Q6ZR85 190 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 CCDC121Q6ZUS5 278 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 SSX6Q7RTT6 188 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 FGFRL1Q8N441 504 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 CD177Q8N6Q3 437 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 ZNRF1Q8ND25 227 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 OR10H4Q8NGA5 316 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 CITED1Q99966 193 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 CDCA4Q9BXL8 241 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 SEMA6AQ9H2E6 1030 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 NEK6Q9HC98 313 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 RAB18Q9NP72 206 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 SIRT7Q9NRC8 400 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 INPP5EQ9NRR6 644 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 GPR173Q9NS66 373 aa8.19□□□□□ -1.1
HDLBP-228ENST00000459788 EXOGQ9Y2C4 368 aaKnown RBP8.19□□□□□ -1.1
HDLBP-228ENST00000459788 NOTCH1P46531 2555 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 M0R129 80 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 TIMM23O14925 209 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SLC16A6O15403 523 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SYNGR1O43759 233 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 RPP14O95059 124 aaKnown RBP8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ALX3O95076 343 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 CYB5AP00167 134 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 IGHV4-59P01825 116 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 MT-ND2P03891 347 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 TK1P04183 234 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SELLP14151 372 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 PRKACBP22694 351 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SAA4P35542 130 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 POLR2IP36954 125 aaKnown RBP8.18□□□□□ -1.1
HDLBP-228ENST00000459788 RBP2P50120 134 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 CAPZA1P52907 286 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ATP1B3P54709 279 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ERVFRD-1P60508 538 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 GMFBP60983 142 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ELF3P78545 371 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-228ENST00000459788 RELBQ01201 579 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ZNF85Q03923 595 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 MEF2CQ06413 473 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-228ENST00000459788 MKXQ8IYA7 352 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SYS1Q8N2H4 156 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 ACBD7Q8N6N7 88 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 PYDC1Q8WXC3 89 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 SPSB1Q96BD6 273 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 BORCS8Q96FH0 119 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 CEP19Q96LK0 163 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 Q96MT0 163 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 MBOAT4Q96T53 435 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 C9orf16Q9BUW7 83 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 TTTY10Q9BZA0 68 aa8.18□□□□□ -1.1
HDLBP-228ENST00000459788 RANBP3Q9H6Z4 567 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-228ENST00000459788 TET2Q6N021 2002 aaPredicted RBP8.17□□□□□ -1.1
HDLBP-228ENST00000459788 LOC107986453A0A1B0GWG9 222 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 SAC3D1A6NKF1 404 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 C17orf98A8MV24 154 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 VGLL3A8MV65 326 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 H3BNX3 289 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 EI24O14681 340 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 MAGEB4O15481 346 aaPredicted RBP8.17□□□□□ -1.1
HDLBP-228ENST00000459788 ZNF737O75373 536 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 PROK1P58294 105 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 UBE2V2Q15819 145 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 SPIN3Q5JUX0 258 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 TMEM200BQ69YZ2 307 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 DHRS7BQ6IAN0 325 aaPredicted RBP8.17□□□□□ -1.1
HDLBP-228ENST00000459788 HCP5Q6MZN7 132 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 TREML4Q6UXN2 200 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 LHFPL2Q6ZUX7 228 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 FAM185AQ8N0U4 392 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 PRSS35Q8N3Z0 413 aa8.17□□□□□ -1.1
HDLBP-228ENST00000459788 C11orf42Q8N5U0 333 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms