RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TCF19Q9Y242 345 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 LOC110117498-PIK3R3F6TDL0 507 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 H3BUI4 141 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 PAX6P26367 422 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 DYNLT3P51808 116 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 ESRRGP62508 458 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 ZNF273Q14593 569 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 TMEM236Q5W0B7 351 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 LHFPL4Q7Z7J7 247 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 ELMOD2Q8IZ81 293 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 OR11H6Q8NGC7 330 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 PRRG3Q9BZD7 231 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 PKIBQ9C010 78 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 OR14J1Q9UGF5 321 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 V9GYS6 101 aa17.4■□□□□ 0.38
CPNE1-220ENST00000458038 MEGF11A6BM72 1044 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 CCDC182A6NF36 153 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 PEX14O75381 377 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ALDOBP05062 364 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ARG1P05089 322 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 CHRM2P08172 466 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 MRPL3P09001 348 aaKnown RBP17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ZNF728P0DKX0 622 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 PRKACGP22612 351 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 CRISP1P54107 249 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 DLX6P56179 175 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ERVK11-1P61568 191 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 IL24Q13007 206 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 NSUN5P1Q3KNT7 163 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 BCL2L15Q5TBC7 163 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ZNF782Q6ZMW2 699 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-220ENST00000458038 Q6ZSR3 168 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 ASRGL1Q7L266 308 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 NRBF2Q96F24 287 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 CNN2Q99439 309 aaKnown RBP17.39■□□□□ 0.37
CPNE1-220ENST00000458038 GPR173Q9NS66 373 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 GTF2A1LQ9UNN4 478 aa17.39■□□□□ 0.37
CPNE1-220ENST00000458038 A6NDX4 124 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 ODF3BA8MYP8 253 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 SRSF10O75494 262 aaKnown RBP17.38■□□□□ 0.37
CPNE1-220ENST00000458038 ALX3O95076 343 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 LOXL3P58215 753 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 MEF2CQ06413 473 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-220ENST00000458038 ZNF626Q68DY1 528 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 ZNF322Q6U7Q0 402 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-220ENST00000458038 HS3ST5Q8IZT8 346 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 R3HDM4Q96D70 268 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 NECAP2Q9NVZ3 263 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 H2AFY2Q9P0M6 372 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-220ENST00000458038 COPS3Q9UNS2 423 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 SLC7A11Q9UPY5 501 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 SNX5Q9Y5X3 404 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 R4GMQ9 66 aa17.38■□□□□ 0.37
CPNE1-220ENST00000458038 PRR32B1ATL7 298 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 T-ENOLP0DO92 83 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 CD28P10747 220 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 CEBPDP49716 269 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 OR12D2P58182 307 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 CXCR4P61073 352 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 MFGE8Q08431 387 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 SSX2Q16385 188 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 CCBE1Q6UXH8 406 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 MEPCEQ7L2J0 689 aaKnown RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 GDPD3Q7L5L3 318 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 DYNAPQ8N1N2 210 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 ASCC1Q8N9N2 400 aaKnown RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 OR14K1Q8NGZ2 314 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 WIPF2Q8TF74 440 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 SGCDQ92629 289 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 WNT10AQ9GZT5 417 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 SEBOXQ9HB31 216 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 PAPOLBQ9NRJ5 636 aaKnown RBP17.37■□□□□ 0.37
CPNE1-220ENST00000458038 OR52A1Q9UKL2 312 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 SLC22A13Q9Y226 551 aa17.37■□□□□ 0.37
CPNE1-220ENST00000458038 IGHV1-8P0DP01 117 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 PIPP12273 146 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-220ENST00000458038 RAB13P51153 203 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 GYS2P54840 703 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 COL10A1Q03692 680 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 OXLD1Q5BKU9 147 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 MINOS1Q5TGZ0 78 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 MRAPQ8TCY5 172 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 APOL4Q9BPW4 351 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 THTPAQ9BU02 230 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 MMP28Q9H239 520 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 MINOS1-NBL1R4GNA1 71 aa17.36■□□□□ 0.37
CPNE1-220ENST00000458038 A0A1B0GTI1 187 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 PRB2P02812 416 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-220ENST00000458038 AZGP1P25311 298 aaKnown RBP17.35■□□□□ 0.37
CPNE1-220ENST00000458038 EDDM3BP56851 147 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 HABP2Q14520 560 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-220ENST00000458038 PLA1AQ53H76 456 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 ARSJQ5FYB0 599 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-220ENST00000458038 HIST2H2BDQ6DRA6 164 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 OR8H2Q8N162 312 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 LYG1Q8N1E2 194 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 CCDC54Q8NEL0 328 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 SNX22Q96L94 193 aa17.35■□□□□ 0.37
CPNE1-220ENST00000458038 CITED2Q99967 270 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-220ENST00000458038 CLN6Q9NWW5 311 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms