RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C12orf73Q69YU5 71 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 KRT74Q7RTS7 529 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 ZSCAN4Q8NAM6 433 aaPredicted RBP12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 TRMT10AQ8TBZ6 339 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 RIBC2Q9H4K1 309 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 MRM2Q9UI43 246 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 SLC7A11Q9UPY5 501 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 V9GYS6 101 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 hCG_1809904A0A1W2PP81 198 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 A0A1W2PPE2 198 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 A0A1W2PR64 198 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 A0A1W2PRV1 198 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 G3V4G9 280 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 PIN1P1O15428 100 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 APOL3O95236 402 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 PROK1P58294 105 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 LY6EQ16553 131 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 KDM4DQ6B0I6 523 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 OR14K1Q8NGZ2 314 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 CIB1Q99828 191 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 SSX3Q99909 188 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 ADI1Q9BV57 179 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 WARS2Q9UGM6 360 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 SLC22A13Q9Y226 551 aa12.85□□□□□ -0.35
CHCHD3-204ENST00000457942 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 H3BNX3 289 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 SYT7O43581 403 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 CLPXO76031 633 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 PIPP12273 146 aaPredicted RBP12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 LGALS4P56470 323 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 TMEM42Q69YG0 159 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 FAM220AQ7Z4H9 259 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 RORBQ92753 470 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 C16orf95Q9H693 158 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 HEXA-AS1Q9H8Q6 139 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 USE1Q9NZ43 259 aa12.84□□□□□ -0.35
CHCHD3-204ENST00000457942 DHRS7CA6NNS2 312 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 ANKRD65E5RJM6 399 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 INMTO95050 263 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 CCL3L1P16619 93 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 HTR1FP30939 366 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 GABRA5P31644 462 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 TMEM200BQ69YZ2 307 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 Q6ZPA2 131 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 ANGPTL5Q86XS5 388 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 C17orf50Q8WW18 174 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 NRIP2Q9BQI9 281 aa12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-204ENST00000457942 A0A1W2PQL4 384 aaPredicted RBP12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 GATBO75879 557 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 TSPAN9O75954 239 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 TK1P04183 234 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 PAX6P26367 422 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 BMXP51813 675 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 EDDM3BP56851 147 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 ERVFRD-1P60508 538 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 ZNF273Q14593 569 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 SLC35E4Q6ICL7 350 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 HCP5Q6MZN7 132 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 CATSPERDQ86XM0 798 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 CALHM1Q8IU99 346 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 OR4C13Q8NGP0 309 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 RFKQ969G6 155 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 CENPNQ96H22 339 aaPredicted RBP12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 PKIBQ9C010 78 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 GNG8Q9UK08 70 aa12.82□□□□□ -0.36
CHCHD3-204ENST00000457942 SERPINA3P01011 423 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 CCL1P22362 96 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 MPZP25189 248 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 CDC42P60953 191 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 EFNB1P98172 346 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 COL10A1Q03692 680 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 IL24Q13007 206 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 FAM189A2Q15884 450 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 PLA1AQ53H76 456 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 OR8J1Q8NGP2 316 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 SLAMF9Q96A28 289 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 BORCS8Q96FH0 119 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms