RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF529Q6P280 563 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 C5orf24Q7Z6I8 188 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 OR2AJ1Q8NGZ0 328 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 UQCC2Q9BRT2 126 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 SLC5A7Q9GZV3 580 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF107Q9UII5 783 aaPredicted RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF318Q5VUA4 2279 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 NPIPB13A6NJU9 1138 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 NPIPB4C9JG80 1138 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 MSTNO14793 375 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 CYC1P08574 325 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 RPS2P15880 293 aaKnown RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 GABRR1P24046 479 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 NTF4P34130 210 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 PTGER4P35408 488 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 MEOX2P50222 304 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 NOVA1P51513 510 aaKnown RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 RRADP55042 308 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 ACER2Q5QJU3 275 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 DHRS11Q6UWP2 260 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 PSMF1Q92530 271 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 HES7Q9BYE0 225 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 RCC2Q9P258 522 aaKnown RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 MCTS1Q9ULC4 181 aaKnown RBP10.84□□□□□ -0.67
LINC00959-201ENST00000456581 AMDHD2Q9Y303 409 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 HDGFL3Q9Y3E1 203 aa10.84□□□□□ -0.67
LINC00959-201ENST00000456581 TRBV6-7A0A0A0MS04 114 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 FAM221AA4D161 298 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 DHRS7CA6NNS2 312 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 MFNGO00587 321 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 ATXN7O15265 892 aaPredicted RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 MPZP25189 248 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 OR3A2P47893 321 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 DSCR4P56555 118 aaPredicted RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 GABREP78334 506 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 H3F3AP84243 136 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 PDCD1Q15116 288 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 C14orf79Q96F83 325 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 TAAR9Q96RI9 348 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 LIME1Q9H400 295 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 PNRC2Q9NPJ4 139 aaKnown RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 IL17BQ9UHF5 180 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 RCL1Q9Y2P8 373 aaKnown RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 ARHGAP21Q5T5U3 1957 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 MUC6Q6W4X9 2439 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 ZNF878C9JN71 531 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 ANGPTL7O43827 346 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 TRAPPC6AO75865 159 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 SLC35A1P78382 337 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 HGFACQ04756 655 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 WIPI1Q5MNZ9 446 aaPredicted RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 C10orf91Q5T1B1 145 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 PRSS54Q6PEW0 395 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 OR6X1Q8NH79 312 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 REEP6Q96HR9 211 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 SPRY4Q9C004 299 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 STRADBQ9C0K7 418 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 TAF9BQ9HBM6 251 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 MMP26Q9NRE1 261 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 LSM5Q9Y4Y9 91 aaKnown RBP10.83□□□□□ -0.68
LINC00959-201ENST00000456581 KIAA1549Q9HCM3 1950 aa10.83□□□□□ -0.68
LINC00959-201ENST00000456581 CSTBP04080 98 aaKnown RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 KISS1Q15726 138 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 UBE2V2Q15819 145 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 FAHD2BQ6P2I3 314 aaPredicted RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 SLC25A47Q6Q0C1 308 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 DEGS2Q6QHC5 323 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 POC1AQ8NBT0 407 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 OR5T2Q8NGG2 359 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 OR14L1PQ8NHC6 308 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 ERGIC1Q969X5 290 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 FAHD2AQ96GK7 314 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 THOC3Q96J01 351 aaKnown RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 EDARQ9UNE0 448 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 LRRC3CA6NJW4 275 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 P04436 131 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 ARG1P05089 322 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 OPRM1P35372 400 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 SUCLG1P53597 346 aaKnown RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 CHAF1BQ13112 559 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 IAH1Q2TAA2 248 aaPredicted RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 CDC6Q99741 560 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 OR10A2Q9H208 303 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 ZFP57Q9NU63 452 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 CARHSP1Q9Y2V2 147 aaKnown RBP10.82□□□□□ -0.68
LINC00959-201ENST00000456581 ESPL1Q14674 2120 aa10.82□□□□□ -0.68
LINC00959-201ENST00000456581 hCG_1809904A0A1W2PP81 198 aa10.81□□□□□ -0.68
LINC00959-201ENST00000456581 A0A1W2PR64 198 aa10.81□□□□□ -0.68
LINC00959-201ENST00000456581 A0A1W2PRV1 198 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms