RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 EIF5A2Q9GZV4 153 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CDH20Q9HBT6 801 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 FGF22Q9HCT0 170 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 IGSF23A1L1A6 192 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CDC14CA4D256 554 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 MBP02144 154 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 MYOGP15173 224 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 MSX1P28360 303 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CTHP32929 405 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PSMD4P55036 377 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PAX9P55771 341 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF74Q16587 644 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 RPL13AP3Q6NVV1 102 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 POMZP3Q6PJE2 187 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 TRAPPC6BQ86SZ2 158 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 M1APQ8TC57 530 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 RAB24Q969Q5 203 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF501Q96CX3 271 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 VSTM2LQ96N03 204 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 HIST1H2AAQ96QV6 131 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 TEX101Q9BY14 249 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 TWSG1Q9GZX9 223 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC25A31Q9H0C2 315 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC25A13Q9UJS0 675 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 DYRK1BQ9Y463 629 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 IRGMA1A4Y4 181 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 LINC01553A4QN01 128 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF705GA8MUZ8 300 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 KIAA1324LA8MWY0 1029 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 C11orf98E9PRG8 122 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CDC14BO60729 498 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 LILRA1O75019 489 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 NPIPB7O75200 414 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ZNF432O94892 652 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CST4P01036 141 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 C5AR1P21730 350 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ADAM8P78325 824 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM3AP98173 230 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PSG4Q00888 419 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ANK2Q01484 3957 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 COL7A1Q02388 2944 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SLC17A1Q14916 467 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PPA1Q15181 289 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 Q6ZWC4 215 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 RTL10Q7L3V2 364 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CPEB2Q7Z5Q1 589 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SUMF1Q8NBK3 374 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 OR52L1Q8NGH7 329 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 NAT6Q93015 286 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PLD4Q96BZ4 506 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 FGGYQ96C11 551 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 MSI2Q96DH6 328 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SDSLQ96GA7 329 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 LINC00615Q96LM1 132 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 CLUHP3Q96NS8 147 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PRRX2Q99811 253 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ACTR3CQ9C0K3 210 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 IGLON5A6NGN9 336 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 SH2D1BO14796 132 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 NSA2O95478 260 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 KLF8O95600 359 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 C4BPBP20851 252 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 RPL4P36578 427 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ARRB1P49407 418 aaPredicted RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 OR5I1Q13606 314 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 DEFB110Q30KQ9 67 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PRAMEF8Q5VWM4 474 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 PRAMEF7Q5VXH5 474 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 RPUSD3Q6P087 351 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 UNQ5815/PRO19632Q6UWF5 114 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 TMEM123Q8N131 208 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 BATF2Q8N1L9 274 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM213BQ8TBF2 198 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 GATAD1Q8WUU5 269 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 R3HDM4Q96D70 268 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ADAD1Q96M93 576 aaKnown RBP3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ETV7Q9Y603 341 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 ADAMTS20P59510 1910 aa3.95□□□□□ -1.78
DEPDC1-202ENST00000456315 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 A0A1B0GU03 582 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 LOC107986453A0A1B0GWG9 222 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 C2orf72A6NCS6 295 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 FAM24AA6NFZ4 105 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 P2RY10O00398 339 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HMGB3O15347 200 aaKnown RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 EFNA2O43921 213 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 NKX2-2O95096 273 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 TSPAN15O95858 294 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HPRT1P00492 218 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 HLA-HP01893 362 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 IL6RP08887 468 aaPredicted RBP3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 CYBAP13498 195 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 OR3A4PP47883 348 aa3.94□□□□□ -1.78
DEPDC1-202ENST00000456315 KHKP50053 298 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms