RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 GABREP78334 506 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 NOXO1Q8NFA2 376 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 OR1N1Q8NGS0 311 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 DDIT4LQ96D03 193 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 RAB39BQ96DA2 213 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 SUCNR1Q9BXA5 334 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 SIRT7Q9NRC8 400 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 COPS7AQ9UBW8 275 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 ANXA10Q9UJ72 324 aa16.54■□□□□ 0.24
SEMA3B-208ENST00000456210 SPTY2D1-AS1A0A0U1RR47 76 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 LIPT2A6NK58 231 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 HSD17B6O14756 317 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 ST8SIA5O15466 376 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 XRCC2O43543 280 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 CTSEP14091 401 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 OR1D4P47884 311 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 C1orf61Q13536 156 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 TTLL10Q6ZVT0 673 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 OR5D18Q8NGL1 313 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 NELFAQ9H3P2 528 aa16.53■□□□□ 0.24
SEMA3B-208ENST00000456210 VPS13AQ96RL7 3174 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BKO60814 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 DIRAS3O95661 229 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 IFNA10P01566 189 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BJP06899 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 CXCL1P09341 107 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 OR5AC1P0C628 307 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BOP23527 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 DUSP1P28562 367 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BBP33778 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 ZNF133P52736 654 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BDP58876 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BCP62807 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 FZD2Q14332 565 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST2H2BEQ16778 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 ZNF674Q2M3X9 581 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 SPSB3Q6PJ21 355 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 SLC38A9Q8NBW4 561 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BHQ93079 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BNQ99877 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 HIST1H2BMQ99879 126 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 CHRNA10Q9GZZ6 450 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 SOHLH2Q9NX45 425 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 KIAA1456Q9P272 454 aa16.52■□□□□ 0.24
SEMA3B-208ENST00000456210 TDRD6O60522 2096 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 ZNF587BE7ETH6 402 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 STMND1H3BQB6 276 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 MSTNO14793 375 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 ST8SIA3O43173 380 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 LY86O95711 162 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 SEMA4FO95754 770 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 SRP19P09132 144 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 PGA4P0DJD7 388 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 PGA3P0DJD8 388 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 OR5H8P0DN80 308 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 TAGLN2P37802 199 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 SUMO3P55854 103 aaPredicted RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 NHLH2Q02577 135 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 SP5Q6BEB4 398 aaPredicted RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 SPNS3Q6ZMD2 512 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 FAM57BQ71RH2 274 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 REC114Q7Z4M0 266 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 OR10D4PQ8NGN7 298 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 CPNE4Q96A23 557 aaPredicted RBP16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 LIME1Q9H400 295 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 HSF4Q9ULV5 492 aa16.52■□□□□ 0.23
SEMA3B-208ENST00000456210 ZNF727A8MUV8 499 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 CLRN1P58418 232 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 GRB2P62993 217 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 KCNMB1Q16558 191 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 SLC25A47Q6Q0C1 308 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 C6orf201Q7Z4U5 140 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 LYZL2Q7Z4W2 148 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 GPR27Q9NS67 375 aa16.51■□□□□ 0.23
SEMA3B-208ENST00000456210 ZNF724A8MTY0 619 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 HEXBP07686 556 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 UBE2KP61086 200 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 UBE2V2Q15819 145 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 FBXW12Q6X9E4 464 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 OR52M1Q8NGK5 317 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 BOD1Q96IK1 185 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 IGHV5-51A0A0C4DH38 117 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 PPP1R2P9O14990 202 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 RER1O15258 196 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 IGHG1P01857 330 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 ZNF728P0DKX0 622 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 CTSSP25774 331 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 FASLGP48023 281 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 ERVFRD-1P60508 538 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 PKIAP61925 76 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 CCL20P78556 96 aa16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 EWSR1Q01844 656 aaKnown RBP eCLIP16.5■□□□□ 0.23
SEMA3B-208ENST00000456210 ZNF266Q14584 549 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms