RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 BORCS8Q96FH0 119 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 COMMD4Q9H0A8 199 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 PLCXD1Q9NUJ7 323 aa14.34□□□□□ -0.11
USP39-208ENST00000455732 RPUSD1Q9UJJ7 312 aaKnown RBP14.34□□□□□ -0.11
USP39-208ENST00000455732 EFCAB10A6NFE3 127 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 PLATP00750 562 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 SELLP14151 372 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 MMP9P14780 707 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 ATF1P18846 271 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 FPR2P25090 351 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 CAV3P56539 151 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 FGF12P61328 243 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 IKZF1Q13422 519 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 MED21Q13503 144 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 DGUOKQ16854 277 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 RPL22L1Q6P5R6 122 aaKnown RBP14.33□□□□□ -0.12
USP39-208ENST00000455732 C9orf139Q6ZV77 190 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 ANGPTL5Q86XS5 388 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 FGFRL1Q8N441 504 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 BPIFB2Q8N4F0 458 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 OR52N1Q8NH53 320 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 C8orf46Q8TAG6 207 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 GGHQ92820 318 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 ZNF488Q96MN9 340 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 PDCD1LG2Q9BQ51 273 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 ZNF69Q9UC07 566 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 PSORS1C1Q9UIG5 152 aa14.33□□□□□ -0.12
USP39-208ENST00000455732 ALX3O95076 343 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 NXPH2O95156 264 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 AZGP1P25311 298 aaKnown RBP14.32□□□□□ -0.12
USP39-208ENST00000455732 RBP2P50120 134 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 ST3GAL4Q11206 333 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 CDK5R1Q15078 307 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 OR2G6Q5TZ20 316 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 LHFPL2Q6ZUX7 228 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 PARP16Q8N5Y8 322 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 JMJD8Q96S16 334 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 DCTN5Q9BTE1 182 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 ESM1Q9NQ30 184 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 CHCHD3Q9NX63 227 aaKnown RBP14.32□□□□□ -0.12
USP39-208ENST00000455732 SLC25A10Q9UBX3 287 aaPredicted RBP14.32□□□□□ -0.12
USP39-208ENST00000455732 MAB21L2Q9Y586 359 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 KPTNQ9Y664 436 aa14.32□□□□□ -0.12
USP39-208ENST00000455732 TRAV40A0A0B4J280 105 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 TRBV2A0A0J9YWF9 115 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 RFPL4AA6NLU0 287 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 RFPL4AL1F8VTS6 287 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 KNG1P01042 644 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 TFF1P04155 84 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 IGHV4-38-2P0DP08 117 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 GABRA2P47869 451 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 GTF2A1P52655 376 aaPredicted RBP14.31□□□□□ -0.12
USP39-208ENST00000455732 ATP1B3P54709 279 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 AQP4P55087 323 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 BPIFB3P59826 476 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 METTL11BQ5VVY1 283 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 XAF1Q6GPH4 301 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 KIR3DL3Q8N743 410 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 ZDHHC22Q8N966 263 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 ZNF485Q8NCK3 441 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 FAM216AQ8WUB2 273 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 CEP19Q96LK0 163 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 WDFY2Q96P53 400 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 OPALINQ96PE5 141 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 SIRPDQ9H106 197 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 VCX3BQ9H321 246 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 CNTD2Q9H8S5 307 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 FKBP14Q9NWM8 211 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 BABAM2Q9NXR7 383 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 CLEC2DQ9UHP7 191 aa14.31□□□□□ -0.12
USP39-208ENST00000455732 OGG1O15527 345 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 XPNPEP2O43895 674 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 TOX4O94842 621 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 PRDX2P32119 198 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 SLC25A26Q70HW3 274 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 SERPINA12Q8IW75 414 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 Q8IYB0 196 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 BCL6BQ8N143 479 aaPredicted RBP14.3□□□□□ -0.12
USP39-208ENST00000455732 ZNF561Q8N587 486 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 CD177Q8N6Q3 437 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 OR13C9Q8NGT0 318 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 RGP1Q92546 391 aaPredicted RBP14.3□□□□□ -0.12
USP39-208ENST00000455732 SMIM19Q96E16 107 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 TBX15Q96SF7 602 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 ZCCHC4Q9H5U6 513 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 NEK6Q9HC98 313 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 DHDHQ9UQ10 334 aa14.3□□□□□ -0.12
USP39-208ENST00000455732 TRBV23-1A0A0A0MS06 115 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 TRIM77I1YAP6 450 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 SFTPBP07988 381 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 MTCP1P56278 107 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 ZNF529Q6P280 563 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 AHSA2Q719I0 299 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 MKXQ8IYA7 352 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 ZNRF1Q8ND25 227 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 TMEM185AQ8NFB2 350 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms