RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CELA3BP08861 270 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 TBPP20226 339 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
CLK3-203ENST00000454830 OR8B8Q15620 311 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 TBC1D28Q2M2D7 210 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 ACTBL2Q562R1 376 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 CRIP3Q6Q6R5 217 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 RFPL4BQ6ZWI9 263 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 FAM210AQ96ND0 272 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 PCDHB16Q9NRJ7 776 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 AK3Q9UIJ7 227 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 ZNF175Q9Y473 711 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 NBASA2RRP1 2371 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 AGFG2O95081 481 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 CA6P23280 308 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 NFYAP23511 347 aaPredicted RBP11.79□□□□□ -0.52
CLK3-203ENST00000454830 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 OR5L1Q8NGL2 311 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 POM121L2Q96KW2 1035 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 OPN4Q9UHM6 478 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 HEATR1Q9H583 2144 aaKnown RBP11.79□□□□□ -0.52
CLK3-203ENST00000454830 ROS1P08922 2347 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 ALX3O95076 343 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 VWA1Q6PCB0 445 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 LYG2Q86SG7 212 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 FAM89BQ8N5H3 189 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 LILRB4Q8NHJ6 448 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
CLK3-203ENST00000454830 TRAPPC2LH3BP13 241 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 C4BPBP20851 252 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 EMG1Q92979 244 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 NUDT16L1Q9BRJ7 211 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 ZNF2Q9BSG1 426 aaPredicted RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 C14orf166Q9Y224 244 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 TNRC6AQ8NDV7 1962 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 GLRA1P23415 457 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 IKZF1Q13422 519 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 BCL2L2Q92843 193 aaPredicted RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 ZNF488Q96MN9 340 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 TEX13DA0A0J9YY54 714 aaPredicted RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 BCL3P20749 454 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 ZNF169Q14929 603 aaPredicted RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 OPCMLQ14982 345 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 ARRDC1Q8N5I2 433 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 ZDHHC22Q8N966 263 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
CLK3-203ENST00000454830 AKAP13Q12802 2813 aa11.78□□□□□ -0.52
CLK3-203ENST00000454830 BEX5Q5H9J7 111 aa11.77□□□□□ -0.52
CLK3-203ENST00000454830 SLC25A42Q86VD7 318 aa11.77□□□□□ -0.52
CLK3-203ENST00000454830 C9orf106Q8NAJ2 232 aa11.77□□□□□ -0.52
CLK3-203ENST00000454830 TM2D1Q9BX74 207 aa11.77□□□□□ -0.52
CLK3-203ENST00000454830 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.52
CLK3-203ENST00000454830 GLI4P10075 376 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 S100A1P23297 94 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
CLK3-203ENST00000454830 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 ZNF767PQ75MW2 155 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.53
CLK3-203ENST00000454830 OR13G1Q8NGZ3 307 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 NPTNQ9Y639 398 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 H3BUI4 141 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 LILRA1O75019 489 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 WNT5AP41221 380 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 RAB14P61106 215 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 TAAR6Q96RI8 345 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 GSKIPQ9P0R6 139 aa11.77□□□□□ -0.53
CLK3-203ENST00000454830 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.53
CLK3-203ENST00000454830 TM4SF5O14894 197 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 OR5H8P0DN80 308 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 PPP3CBP16298 524 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 PRKACAP17612 351 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 ERVS71-1P61550 626 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
CLK3-203ENST00000454830 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 RTL6Q6ICC9 239 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 RPUSD3Q6P087 351 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms