RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 WNT4P56705 351 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 TAS2R43P59537 309 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 IRF3Q14653 427 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 DGUOKQ16854 277 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 ANGPTL5Q86XS5 388 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 STX19Q8N4C7 294 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 NANOGP1Q8N7R0 232 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 OR13C9Q8NGT0 318 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 GATAD2BQ8WXI9 593 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 NUDT16L1Q9BRJ7 211 aaKnown RBP11.74□□□□□ -0.53
HDAC4-205ENST00000454542 CDCA4Q9BXL8 241 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 DUSP21Q9H596 190 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 ZCCHC4Q9H5U6 513 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 C7orf69Q9H7B7 122 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 SNTG1Q9NSN8 517 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 CHCHD3Q9NX63 227 aaKnown RBP11.74□□□□□ -0.53
HDAC4-205ENST00000454542 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 DHDHQ9UQ10 334 aa11.74□□□□□ -0.53
HDAC4-205ENST00000454542 LSM2Q9Y333 95 aaKnown RBP11.74□□□□□ -0.53
HDAC4-205ENST00000454542 MYL12BO14950 172 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 GPR37O15354 613 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 IFNA2P01563 188 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 TFF1P04155 84 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 MMP9P14780 707 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 ADRA2CP18825 462 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 ATP1B3P54709 279 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 CAV3P56539 151 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 GMFBP60983 142 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 RPS11P62280 158 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 IL13RA1P78552 427 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 BDH1Q02338 343 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 ACSM1Q08AH1 577 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 KLF17Q5JT82 389 aaPredicted RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 CD276Q5ZPR3 534 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 BTNL3Q6UXE8 466 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 C8orf46Q8TAG6 207 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 GPR148Q8TDV2 347 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 TSEN15Q8WW01 171 aaKnown RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 SGCDQ92629 289 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 DMRTB1Q96MA1 342 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 MRI1Q9BV20 369 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 MTCH1Q9NZJ7 389 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 RRP15Q9Y3B9 282 aaKnown RBP11.73□□□□□ -0.53
HDAC4-205ENST00000454542 MAB21L2Q9Y586 359 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 AUP1Q9Y679 476 aa11.73□□□□□ -0.53
HDAC4-205ENST00000454542 F8VVB4 439 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 F8VWA3 439 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 SULT1B1O43704 296 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 NXPH2O95156 264 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 KNG1P01042 644 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 EPHA1P21709 976 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 CRHBPP24387 322 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 ZP1P60852 638 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 YIF1BQ5BJH7 314 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 RNF144BQ7Z419 303 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 SERPINA12Q8IW75 414 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 DCTN5Q9BTE1 182 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 RASSF4Q9H2L5 321 aa11.72□□□□□ -0.53
HDAC4-205ENST00000454542 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
HDAC4-205ENST00000454542 NDUFB3O43676 98 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 LIPFP07098 398 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 FSTP19883 344 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 PDZK1IP1Q13113 114 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 BTN2A1Q7KYR7 527 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 Q8IYB0 196 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 CD177Q8N6Q3 437 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 ZFP41Q8N8Y5 198 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 OR5D14Q8NGL3 314 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 OR13C5Q8NGS8 318 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 NANPQ8TBE9 248 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 ST8SIA4Q92187 359 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 GHSRQ92847 366 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 MYDGFQ969H8 173 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 TMEM106AQ96A25 262 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SLAMF9Q96A28 289 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 MED30Q96HR3 178 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 MND1Q9BWT6 205 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SIRPDQ9H106 197 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SCN3BQ9NY72 215 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-205ENST00000454542 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 ERGIC3Q9Y282 383 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 PCDHGB5Q9Y5G0 923 aa11.71□□□□□ -0.53
HDAC4-205ENST00000454542 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 RFPL4AA6NLU0 287 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF879B4DU55 563 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms