RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 TGFAP01135 160 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 UCHL1P09936 223 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SRMP19623 302 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 FABP5Q01469 135 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SMIM21Q3B7S5 101 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 ESCO2Q56NI9 601 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 LYPD2Q6UXB3 125 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 CLEC9AQ6UXN8 241 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 TMEM91Q6ZNR0 172 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SLC36A1Q7Z2H8 476 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 CDH26Q8IXH8 852 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 ZSCAN4Q8NAM6 433 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SEH1LQ96EE3 360 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 MED30Q96HR3 178 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 S100A13Q99584 98 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SMR3AQ99954 134 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 NRIP2Q9BQI9 281 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 RHOFQ9HBH0 211 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 SMURF1Q9HCE7 757 aa12.21□□□□□ -0.45
NCKIPSD-207ENST00000453349 FAM157AC9JC47 383 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 F5H0A9 414 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 TMPRSS2O15393 492 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 CD5LO43866 347 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 FOXH1O75593 365 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 LY6G6DO95868 133 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 GALP22466 123 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 PTGFRP43088 359 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 GABRA2P47869 451 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 NPY4RP50391 375 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 GNB2P62879 340 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 FAM27D1Q5T7N8 215 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 ATPAF1Q5TC12 328 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 FIP1L1Q6UN15 594 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 BATF2Q8N1L9 274 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 NKAIN3Q8N8D7 197 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 CCL13Q99616 98 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 FAM192AQ9GZU8 254 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 DNTTIP1Q9H147 329 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 KAAG1Q9UBP8 84 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 GLS2Q9UI32 602 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 ING4Q9UNL4 249 aa12.2□□□□□ -0.46
NCKIPSD-207ENST00000453349 TRDV1A0A1B0GX56 115 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 NKX6-3A6NJ46 265 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 ANGPTL7O43827 346 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 KDM4BO94953 1096 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 MSMBP08118 114 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 PSG2P11465 335 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 BCL3P20749 454 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 PITPNBP48739 271 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 BMXP51813 675 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZP1P60852 638 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 GLT8D1Q68CQ7 371 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 STUMQ69YW2 141 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 CRIP3Q6Q6R5 217 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 JAGN1Q8N5M9 183 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 EMG1Q92979 244 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 MUL1Q969V5 352 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 SSBP3Q9BWW4 388 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 ELL3Q9HB65 397 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 PCDHB16Q9NRJ7 776 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 SSR3Q9UNL2 185 aa12.19□□□□□ -0.46
NCKIPSD-207ENST00000453349 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 NDUFB3O43676 98 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 KNG1P01042 644 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 JUNBP17275 347 aaPredicted RBP12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 PRDX2P32119 198 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 NPBWR2P48146 333 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 GP2P55259 537 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 LCN2P80188 198 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 RSU1Q15404 277 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 ZNF788Q6ZQV5 615 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 ANGPTL6Q8NI99 470 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 PPIL3Q9H2H8 161 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 EXOSC4Q9NPD3 245 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 OR14J1Q9UGF5 321 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 GSTK1Q9Y2Q3 226 aa12.18□□□□□ -0.46
NCKIPSD-207ENST00000453349 OTOGQ6ZRI0 2925 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms