RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 MTCH1Q9NZJ7 389 aa13.11□□□□□ -0.31
RBM39-219ENST00000453310 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
RBM39-219ENST00000453310 F8P00451 2351 aa13.11□□□□□ -0.31
RBM39-219ENST00000453310 ABCA2Q9BZC7 2435 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 F5H0A9 414 aaPredicted RBP13.1□□□□□ -0.31
RBM39-219ENST00000453310 ANGPTL7O43827 346 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 ARL6IP5O75915 188 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 NXPH2O95156 264 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 MAS1P04201 325 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 RPS2P15880 293 aaKnown RBP13.1□□□□□ -0.31
RBM39-219ENST00000453310 ZNF93P35789 620 aaPredicted RBP13.1□□□□□ -0.31
RBM39-219ENST00000453310 ERVK11-1P61568 191 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 SMIM21Q3B7S5 101 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 ACP7Q6ZNF0 438 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 NKAIN3Q8N8D7 197 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
RBM39-219ENST00000453310 HES4Q9HCC6 221 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 SNTG1Q9NSN8 517 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 RASL12Q9NYN1 266 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
RBM39-219ENST00000453310 IGKV1-12A0A0C4DH73 117 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 NDUFA2O43678 99 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 IGKV1D-12P01611 117 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 TMEM225BP0DP42 221 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
RBM39-219ENST00000453310 SRMP19623 302 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 BCL3P20749 454 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 GALP22466 123 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 GZMKP49863 264 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 STUMQ69YW2 141 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 LYPD2Q6UXB3 125 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 SAXO1Q8IYX7 474 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
RBM39-219ENST00000453310 OR51F2Q8NH61 342 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 C1orf159Q96HA4 380 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 MIOXQ9UGB7 285 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 STUB1Q9UNE7 303 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 ZANQ9Y493 2812 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 MED13LQ71F56 2210 aa13.09□□□□□ -0.31
RBM39-219ENST00000453310 MEGF11A6BM72 1044 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 FAM157AC9JC47 383 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 F8VVB4 439 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 F8VWA3 439 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 TNFRSF13BO14836 293 aaPredicted RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 ADAM20O43506 726 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 KDM4BO94953 1096 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 WNT2P09544 360 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 CD36P16671 472 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 ADRA2CP18825 462 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 OR3A4PP47883 348 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 NPBWR2P48146 333 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 NLRC3Q7RTR2 1065 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 LRRTM1Q86UE6 522 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 Q8IYB0 196 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 JAGN1Q8N5M9 183 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 PXT1Q8NFP0 134 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 OR8B3Q8NGG8 313 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 ANGPTL6Q8NI99 470 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 EMG1Q92979 244 aaKnown RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 OR8B2Q96RD0 313 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 SMR3AQ99954 134 aa13.08□□□□□ -0.32
RBM39-219ENST00000453310 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
RBM39-219ENST00000453310 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 KNG1P01042 644 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 PSG2P11465 335 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 CPT2P23786 658 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 PTGFRP43088 359 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
RBM39-219ENST00000453310 KRTAP1-1Q07627 177 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 C1QL2Q7Z5L3 287 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 MSI2Q96DH6 328 aaKnown RBP13.07□□□□□ -0.32
RBM39-219ENST00000453310 CCL13Q99616 98 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
RBM39-219ENST00000453310 CTSZQ9UBR2 303 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 ABCA1O95477 2261 aa13.07□□□□□ -0.32
RBM39-219ENST00000453310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.06□□□□□ -0.322e-9■■□□□ 12.5
RBM39-219ENST00000453310 IGKV1D-17A0A075B6S4 117 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 A0A1B0GW55 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 RFPL4AA6NLU0 287 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 B4DSR2 109 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 RFPL4AL1F8VTS6 287 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 TFF1P04155 84 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 SFTPBP07988 381 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms