RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CEP152O94986 1710 aa3.56□□□□□ -1.84
HMGB3P21-201ENST00000452483 ADAMTSL3P82987 1691 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 NCOA1Q15788 1441 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 NRCAMQ92823 1304 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SMIM35A0A1B0GVV1 85 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRORSD1PA6NEY8 169 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR4C46A6NHA9 309 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 J3QT63 122 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CRLF1O75462 422 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 REM1O75628 298 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SULT1C4O75897 302 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 GPR75O95800 540 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRSS1P07477 247 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SULT1A3P0DMM9 295 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SULT1A4P0DMN0 295 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PSG1P11464 419 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 COX4I1P13073 169 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 GABRA1P14867 456 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PSMB1P20618 241 aaKnown RBP3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 GZMHP20718 246 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 S100PP25815 95 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CD34P28906 385 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR1E2P47887 323 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TPI1P60174 286 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 RAP1BP61224 184 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 HBG1P69891 147 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 HBG2P69892 147 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TFF2Q03403 129 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SURF2Q15527 256 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SMIM21Q3B7S5 101 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 C14orf28Q4W4Y0 310 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM128Q5BJH2 165 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 KLF17Q5JT82 389 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PAGE3Q5JUK9 113 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM205Q6UW68 189 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PAMR1Q6UXH9 720 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 C4orf22Q6V702 233 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PEX26Q7Z412 305 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PTAR1Q7Z6K3 402 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 NAA40Q86UY6 237 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CALHM3Q86XJ0 350 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 ANGPTL5Q86XS5 388 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLC35F6Q8N357 371 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM86BQ8N661 226 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR2M7Q8NG81 312 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR8J3Q8NGG0 315 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR4X1Q8NH49 305 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 C16orf52Q8NHV5 167 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 LHFPL5Q8TAF8 219 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CD200R1Q8TD46 325 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 AGAP11Q8TF27 550 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 ABHD3Q8WU67 409 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 LRRC29Q8WV35 223 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CLDN23Q96B33 292 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 DIRAS2Q96HU8 199 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 BTN2A3PQ96KV6 586 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 RDH12Q96NR8 316 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRSS22Q9GZN4 317 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 RBM38Q9H0Z9 239 aaKnown RBP3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM100Q9NV29 134 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 ANGPT4Q9Y264 503 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 ORC6Q9Y5N6 252 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 TAF1LQ8IZX4 1826 aa3.55□□□□□ -1.84
HMGB3P21-201ENST00000452483 CCNB3Q8WWL7 1395 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRDM2Q13029 1718 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGLV5-39A0A0G2JS06 123 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 A0A0U1RQV1 116 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 TEX48A0A1B0GUV7 120 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 EXOC1LA0A1B0GW35 172 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGSF23A1L1A6 192 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RBFOX3A6NFN3 312 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MSGN1A6NI15 193 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 LINC01548A6NM66 108 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 LINC01619G3V211 115 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 I3L4J1 428 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLC17A3O00476 420 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 XKRYO14609 159 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 GALR3O60755 368 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 TRMUO75648 421 aaKnown RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGKV1D-16P01601 117 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ALPLP05186 524 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 REG1AP05451 166 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRSS2P07478 247 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MMP7P09237 267 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ESDP10768 282 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SELEP16581 610 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 GABRR1P24046 479 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MPGP29372 298 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLC6A1P30531 599 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 GGT2P36268 569 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MYCNOSP40205 109 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 AKR1C3P42330 323 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MEOX2P50222 304 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RAB5BP61020 215 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 LMO4P61968 165 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RHOBP62745 196 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 CACNG7P62955 275 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 DEFA6Q01524 100 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 PMVKQ15126 192 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 CEACAM16Q2WEN9 425 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms