RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 RAB1CQ92928 201 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 RFT1Q96AA3 541 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 TIMD4Q96H15 378 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 CEP19Q96LK0 163 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 NAA50Q9GZZ1 169 aaKnown RBP9.73□□□□□ -0.85
SCN9A-204ENST00000452182 RNF167Q9H6Y7 350 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 CNTD2Q9H8S5 307 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 HES4Q9HCC6 221 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 DCAF16Q9NXF7 216 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 IL36GQ9NZH8 169 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 GHRLQ9UBU3 117 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 AK6Q9Y3D8 172 aaKnown RBP9.73□□□□□ -0.85
SCN9A-204ENST00000452182 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 SLC17A2O00624 439 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 SLC22A1O15245 554 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 SPRY1O43609 319 aaPredicted RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 TMEM127O75204 238 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 PLATP00750 562 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 TMEM225BP0DP42 221 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 MUC1P15941 1255 aaPredicted RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 OR3A4PP47883 348 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 BTG1P62324 171 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 CLEC12BQ2HXU8 276 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 TEX36Q5VZQ5 186 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 ELP2Q6IA86 826 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 FAM90A1Q86YD7 464 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 OR5D18Q8NGL1 313 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 TBC1D15Q8TC07 691 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 C12orf43Q96C57 262 aaKnown RBP9.72□□□□□ -0.85
SCN9A-204ENST00000452182 SMURF1Q9HCE7 757 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
SCN9A-204ENST00000452182 A0A0G2JK05 382 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 OOEPA6NGQ2 149 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 IFITM5A6NNB3 132 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 NOTOA8MTQ0 251 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 TRAPPC2LH3BP13 241 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 PPIHO43447 177 aaKnown RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 AKR7A2O43488 359 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 ANGPTL7O43827 346 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 IL1AP01583 271 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 IGHV2-70P01814 119 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 UBBP0CG47 229 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 EGR1P18146 543 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 GLRA1P23415 457 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 HTR2CP28335 458 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 GPR6P46095 362 aaPredicted RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 BMXP51813 675 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 ART1P52961 327 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 VBP1P61758 197 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 NCS1P62166 190 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 RELBQ01201 579 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 GPR176Q14439 515 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 C1QL2Q7Z5L3 287 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 NR2C2APQ86WQ0 139 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 LRRC28Q86X40 367 aaPredicted RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 CROCCP3Q8IVE0 287 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 MUC20Q8N307 709 aaPredicted RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 OR4D6Q8NGJ1 314 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 SLAMF9Q96A28 289 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 S100A13Q99584 98 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 PIMREGQ9BSJ6 248 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 FAM192AQ9GZU8 254 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 RBM38Q9H0Z9 239 aaKnown RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 PCDHB16Q9NRJ7 776 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 MRPS28Q9Y2Q9 187 aaKnown RBP9.71□□□□□ -0.85
SCN9A-204ENST00000452182 WIPI2Q9Y4P8 454 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 CEPT1Q9Y6K0 416 aa9.71□□□□□ -0.85
SCN9A-204ENST00000452182 AKAP9Q99996 3911 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 TRAV38-1A0A0B4J264 116 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF701M0R085 212 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-204ENST00000452182 AIPO00170 330 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 LGALS8O00214 317 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 CDRT1O95170 752 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 SFTPBP07988 381 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 SLC25A16P16260 332 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 TGFBR1P36897 503 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 MDH2P40926 338 aaKnown RBP9.71□□□□□ -0.86
SCN9A-204ENST00000452182 NR4A2P43354 598 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 CAPZA1P52907 286 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 OR10A3P58181 314 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 HNRNPA0Q13151 305 aaKnown RBP9.71□□□□□ -0.86
SCN9A-204ENST00000452182 ZMYND11Q15326 602 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 KCNJ8Q15842 424 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 CARTPTQ16568 116 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 DGUOKQ16854 277 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 MICBQ29980 383 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 SMIM21Q3B7S5 101 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF404Q494X3 552 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 AWAT2Q6E213 333 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 GLIPR1L1Q6UWM5 242 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 ACP7Q6ZNF0 438 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms