RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 SAMD10Q9BYL1 202 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 SHCBP1LQ9BZQ2 653 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 SLC38A1Q9H2H9 487 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 PLEKHA1Q9HB21 404 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 IFT46Q9NQC8 304 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 RGS18Q9NS28 235 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 IMP3Q9NV31 184 aaKnown RBP2.25□□□□□ -2.05
VPS8-211ENST00000452140 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 IL20Q9NYY1 176 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 POLA1P09884 1462 aaPredicted RBP2.25□□□□□ -2.05
VPS8-211ENST00000452140 RALGAPBQ86X10 1494 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 SETD1AO15047 1707 aaKnown RBP2.25□□□□□ -2.05
VPS8-211ENST00000452140 MYOM1P52179 1685 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 ADGBQ8N7X0 1667 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 MYH13Q9UKX3 1938 aa2.25□□□□□ -2.05
VPS8-211ENST00000452140 COL22A1Q8NFW1 1626 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 BIVM-ERCC5R4GMW8 1640 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 UGGT1Q9NYU2 1555 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 HACD1B0YJ81 288 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 K7EM74 188 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 LIN7AO14910 233 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 TOX3O15405 576 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 ATP8B1O43520 1251 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SGCEO43556 437 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 ZNF189O75820 626 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 HLA-DQB1P01920 261 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 LIPCP11150 499 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 CD70P32970 193 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 EVI2BP34910 448 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 PRLHRP49683 370 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 XKP51811 444 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 EMP2P54851 167 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 VSNL1P62760 191 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SLC35B1P78383 322 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SLC39A6Q13433 755 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 EXOC3L4Q17RC7 722 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 C5orf64Q2M2E5 130 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 RNASE13Q5GAN3 156 aaKnown RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 MFSD14CQ5VZR4 134 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 FAM173BQ6P4H8 233 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 FAHD1Q6P587 224 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 CLEC18BQ6UXF7 455 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 FAM151BQ6UXP7 276 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SSX6Q7RTT6 188 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 DCXRQ7Z4W1 244 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 LRRC34Q8IZ02 419 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 RNF182Q8N6D2 247 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 WDR31Q8NA23 367 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 NECAP1Q8NC96 275 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 OR51A7Q8NH64 312 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 UBA3Q8TBC4 463 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 CDX2Q99626 313 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 CIB1Q99828 191 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 ZNF2Q9BSG1 426 aaPredicted RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 DCUN1D5Q9BTE7 237 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 TMEM243Q9BU79 118 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SPZ1Q9BXG8 430 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 YIPF3Q9GZM5 350 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 LRRC19Q9H756 370 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 TMBIM4Q9HC24 238 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 NAGKQ9UJ70 344 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 MYO5CQ9NQX4 1742 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 PLA2R1Q13018 1463 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 TCOF1Q13428 1488 aaKnown RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 GAPVD1Q14C86 1478 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 SHANK2Q9UPX8 1470 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 ITSN2Q9NZM3 1697 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 YTHDC2Q9H6S0 1430 aaKnown RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 SMARCA4P51532 1647 aa2.24□□□□□ -2.05
VPS8-211ENST00000452140 RNF17Q9BXT8 1623 aaKnown RBP2.24□□□□□ -2.05
VPS8-211ENST00000452140 ARHGEF5Q12774 1597 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 EFCAB5A4FU69 1503 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 LMTK2Q8IWU2 1503 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 EHBP1L1Q8N3D4 1523 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 VWA8A3KMH1 1905 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 MYO10Q9HD67 2058 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 COL4A4P53420 1690 aaPredicted RBP2.23□□□□□ -2.05
VPS8-211ENST00000452140 PZPP20742 1482 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 IQSEC2Q5JU85 1478 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 A0A0A6YYH2 397 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 A6NJ64 397 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 SEC14L6B5MCN3 397 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 TRAPPC3O43617 180 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 SERPINB7O75635 380 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 TRAPPC6AO75865 159 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 IGLV3-25P01717 112 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 ZNF688P0C7X2 276 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 ME2P23368 584 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 HLA-DMAP28067 261 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 PFN2P35080 140 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 PCK1P35558 622 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 GGT2P36268 569 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 ARR3P36575 388 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 PPP1R2P41236 205 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 MAGEA3P43357 314 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 PPICP45877 212 aa2.23□□□□□ -2.05
VPS8-211ENST00000452140 RPL31P62899 125 aaKnown RBP2.23□□□□□ -2.05
VPS8-211ENST00000452140 DYNC1I2Q13409 638 aaKnown RBP2.23□□□□□ -2.05
VPS8-211ENST00000452140 ZNHIT3Q15649 155 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms