RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PRRG3Q9BZD7 231 aa22.03■■□□□ 1.12
USP42-204ENST00000451154 MOB1AQ9H8S9 216 aa22.03■■□□□ 1.12
USP42-204ENST00000451154 CLN6Q9NWW5 311 aa22.03■■□□□ 1.12
USP42-204ENST00000451154 SNX5Q9Y5X3 404 aa22.03■■□□□ 1.12
USP42-204ENST00000451154 RPP14O95059 124 aaKnown RBP22.02■■□□□ 1.12
USP42-204ENST00000451154 KIR2DS4P43632 304 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 ZNF273Q14593 569 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 ODF4Q2M2E3 257 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 CRIP3Q6Q6R5 217 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 CALHM1Q8IU99 346 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 HES4Q9HCC6 221 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 USE1Q9NZ43 259 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 FOXJ3Q9UPW0 622 aa22.02■■□□□ 1.12
USP42-204ENST00000451154 ZAR1LA6NP61 321 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 H3BSH0 61 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 TK1P04183 234 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 PIPP12273 146 aaPredicted RBP22.01■■□□□ 1.11
USP42-204ENST00000451154 EFNB2P52799 333 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 LGALS4P56470 323 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 HERPUD1Q15011 391 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 AANATQ16613 207 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 C12orf73Q69YU5 71 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 ZNF782Q6ZMW2 699 aaPredicted RBP22.01■■□□□ 1.11
USP42-204ENST00000451154 Q6ZTK2 550 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 SSX6Q7RTT6 188 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 OR4C13Q8NGP0 309 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 TRMT10AQ8TBZ6 339 aaKnown RBP22.01■■□□□ 1.11
USP42-204ENST00000451154 PIFOQ8TCI5 191 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 TBX5Q99593 518 aa22.01■■□□□ 1.11
USP42-204ENST00000451154 CADM1Q9BY67 442 aaKnown RBP22.01■■□□□ 1.11
USP42-204ENST00000451154 hCG_1809904A0A1W2PP81 198 aa22■■□□□ 1.11
USP42-204ENST00000451154 A0A1W2PPE2 198 aa22■■□□□ 1.11
USP42-204ENST00000451154 FAM230AA0A1W2PPH8 454 aa22■■□□□ 1.11
USP42-204ENST00000451154 A0A1W2PR64 198 aa22■■□□□ 1.11
USP42-204ENST00000451154 A0A1W2PRV1 198 aa22■■□□□ 1.11
USP42-204ENST00000451154 G3V2T6 193 aa22■■□□□ 1.11
USP42-204ENST00000451154 MPZP25189 248 aa22■■□□□ 1.11
USP42-204ENST00000451154 Q6ZSR3 168 aa22■■□□□ 1.11
USP42-204ENST00000451154 LHFPL4Q7Z7J7 247 aa22■■□□□ 1.11
USP42-204ENST00000451154 C11orf44Q8N8P7 122 aa22■■□□□ 1.11
USP42-204ENST00000451154 BCAS4Q8TDM0 211 aa22■■□□□ 1.11
USP42-204ENST00000451154 MEX3AA1L020 520 aaKnown RBP21.99■■□□□ 1.11
USP42-204ENST00000451154 ERVK11-1P61568 191 aa21.99■■□□□ 1.11
USP42-204ENST00000451154 ATP6AP1Q15904 470 aa21.99■■□□□ 1.11
USP42-204ENST00000451154 YIPF7Q8N8F6 280 aa21.99■■□□□ 1.11
USP42-204ENST00000451154 MEGF11A6BM72 1044 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 K7N7A8 449 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 INMTO95050 263 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 COL10A1Q03692 680 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 KDM4DQ6B0I6 523 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 DYNAPQ8N1N2 210 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 PKIBQ9C010 78 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 RAB18Q9NP72 206 aa21.98■■□□□ 1.11
USP42-204ENST00000451154 DSCAML1Q8TD84 2053 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 DHRS7CA6NNS2 312 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 F8VVB4 439 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 F8VWA3 439 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 CHST1O43916 411 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 APOL3O95236 402 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 KRT8P05787 483 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 CCL1P22362 96 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 RAB13P51153 203 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 DLX6P56179 175 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 IL24Q13007 206 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 UBE2V2Q15819 145 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 PLA1AQ53H76 456 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 AMIGO2Q86SJ2 522 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 GID4Q8IVV7 300 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 KLHDC1Q8N7A1 406 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 ASCC1Q8N9N2 400 aaKnown RBP21.97■■□□□ 1.11
USP42-204ENST00000451154 OR2T6Q8NHC8 308 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 NKX3-1Q99801 234 aaPredicted RBP21.97■■□□□ 1.11
USP42-204ENST00000451154 MTCH1Q9NZJ7 389 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.97■■□□□ 1.11
USP42-204ENST00000451154 SLC7A11Q9UPY5 501 aa21.97■■□□□ 1.11
USP42-204ENST00000451154 A0A1W2PQL4 384 aaPredicted RBP21.96■■□□□ 1.11
USP42-204ENST00000451154 FAM90A8PA6NJQ4 464 aa21.96■■□□□ 1.11
USP42-204ENST00000451154 C17orf98A8MV24 154 aa21.96■■□□□ 1.11
USP42-204ENST00000451154 CATSPERDQ86XM0 798 aa21.96■■□□□ 1.11
USP42-204ENST00000451154 WARS2Q9UGM6 360 aaKnown RBP21.96■■□□□ 1.11
USP42-204ENST00000451154 IGKV1-27A0A075B6S5 117 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 VSIG10L2P0DP72 767 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 POLR2IP36954 125 aaKnown RBP21.95■■□□□ 1.1
USP42-204ENST00000451154 C11orf88Q6PI97 169 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 ZDHHC13Q8IUH4 622 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 CFHR4Q92496 578 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 SLAMF9Q96A28 289 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 NPFFR1Q9GZQ6 430 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 RANBP3Q9H6Z4 567 aaPredicted RBP21.95■■□□□ 1.1
USP42-204ENST00000451154 NOTCH3Q9UM47 2321 aa21.95■■□□□ 1.1
USP42-204ENST00000451154 PLXNB1O43157 2135 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 A0A0G2JK05 382 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 METTL15A6NJ78 407 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 SYT7O43581 403 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 ARG1P05089 322 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 CHRM2P08172 466 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 OR2T7P0C7T2 308 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 FASP25445 335 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 EDDM3BP56851 147 aa21.94■■□□□ 1.1
USP42-204ENST00000451154 CEP19Q96LK0 163 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms