RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR4F5Q8NH21 305 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ADI1Q9BV57 179 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 DPAGT1Q9H3H5 408 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 PLEKHA1Q9HB21 404 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ZNRD1Q9P1U0 126 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 GNG8Q9UK08 70 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 SLC7A11Q9UPY5 501 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 EXOGQ9Y2C4 368 aaKnown RBP15.87■□□□□ 0.13
USP40-207ENST00000450940 IGKV1-27A0A075B6S5 117 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 LOC107986453A0A1B0GWG9 222 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 SLC1A7O00341 560 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 GATBO75879 557 aaKnown RBP15.86■□□□□ 0.13
USP40-207ENST00000450940 ISG15P05161 165 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 CRYBA1P05813 215 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 GABRB1P18505 474 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 RAG2P55895 527 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 KLRD1Q13241 179 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 HCP5Q6MZN7 132 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 FAM220AQ7Z4H9 259 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 C11orf42Q8N5U0 333 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 OR5D13Q8NGL4 314 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 OR2G2Q8NGZ5 317 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 PP6455Q8WZ26 134 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 RNFT2Q96EX2 444 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 MBOAT4Q96T53 435 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 FAM234AQ9H0X4 552 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 BEX1Q9HBH7 125 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 C19orf12Q9NSK7 152 aa15.86■□□□□ 0.13
USP40-207ENST00000450940 FAM230AA0A1W2PPH8 454 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 SLC16A6O15403 523 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 GPR137BO60478 399 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 SERPINA3P01011 423 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 KNG1P01042 644 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 CCR9P51686 369 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 PRB3Q04118 309 aaPredicted RBP15.85■□□□□ 0.13
USP40-207ENST00000450940 TAF9Q16594 264 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 TMEM244Q5VVB8 128 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 EGFL6Q8IUX8 553 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 RDH10Q8IZV5 341 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 DNAAF1Q8NEP3 725 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 TRMT10AQ8TBZ6 339 aaKnown RBP15.85■□□□□ 0.13
USP40-207ENST00000450940 C9orf16Q9BUW7 83 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 SEBOXQ9HB31 216 aaPredicted RBP15.85■□□□□ 0.13
USP40-207ENST00000450940 MTCH1Q9NZJ7 389 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 FRRS1LQ9P0K9 344 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 TRRAPQ9Y4A5 3859 aa15.85■□□□□ 0.13
USP40-207ENST00000450940 DAPL1A0PJW8 107 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 SNTNA6NMZ2 147 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 H3BSH0 61 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 TK1P04183 234 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 SAA4P35542 130 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 CEBPDP49716 269 aaPredicted RBP15.84■□□□□ 0.13
USP40-207ENST00000450940 CAPZA1P52907 286 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 OR12D2P58182 307 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 NANOS3P60323 173 aaKnown RBP15.84■□□□□ 0.13
USP40-207ENST00000450940 RPL31P62899 125 aaKnown RBP15.84■□□□□ 0.13
USP40-207ENST00000450940 TMEM200BQ69YZ2 307 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 FAM185AQ8N0U4 392 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 ACBD7Q8N6N7 88 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 RHOXF1Q8NHV9 184 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 SLC29A1Q99808 456 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 S100A14Q9HCY8 104 aa15.84■□□□□ 0.13
USP40-207ENST00000450940 SF3B6Q9Y3B4 125 aaKnown RBP15.84■□□□□ 0.13
USP40-207ENST00000450940 A0A1W2PPH5 198 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 MEIOCA2RUB1 952 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 CLPSL1A2RUU4 121 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 F8VVB4 439 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 F8VWA3 439 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 H0YAE9 185 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 K7N7A8 449 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 MIDNQ504T8 468 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 OLFML2AQ68BL7 652 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 GDPGP1Q6ZNW5 385 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 UTS2BQ765I0 119 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 PNKDQ8N490 385 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 WFDC12Q8WWY7 111 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 LGALS12Q96DT0 336 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 ADAT3Q96EY9 351 aaPredicted RBP15.83■□□□□ 0.12
USP40-207ENST00000450940 AJUBAQ96IF1 538 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 CEP19Q96LK0 163 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 GMPPBQ9Y5P6 360 aa15.83■□□□□ 0.12
USP40-207ENST00000450940 IGKV1-9A0A0C4DH69 117 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PRD5 423 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PRF3 423 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PRM7 423 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 EBAG9O00559 213 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 MPZL2O60487 215 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 ZNF737O75373 536 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 CHRM2P08172 466 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 CNN3Q15417 329 aaKnown RBP15.82■□□□□ 0.12
USP40-207ENST00000450940 ENTHD1Q8IYW4 607 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 ZSCAN4Q8NAM6 433 aaPredicted RBP15.82■□□□□ 0.12
USP40-207ENST00000450940 BEND2Q8NDZ0 799 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 PELI1Q96FA3 418 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 BORCS8Q96FH0 119 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 AASSQ9UDR5 926 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 OR14J1Q9UGF5 321 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 VPREB3Q9UKI3 123 aa15.82■□□□□ 0.12
USP40-207ENST00000450940 OR4C45A6NMZ5 311 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 RBP2P50120 134 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms