RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RSPO1Q2MKA7 263 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 MEPCEQ7L2J0 689 aaKnown RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 OR10H5Q8NGA6 315 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 RASL12Q9NYN1 266 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 PLEK2Q9NYT0 353 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 FXYD6-FXYD2A0A087WZ82 144 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 IGHV2OR16-5A0A0B4J2B6 119 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 PRR32B1ATL7 298 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 SYNGR3O43761 229 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 DOK2O60496 412 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 EIF3GO75821 320 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 CCNOP22674 350 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 RAB5BP61020 215 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 HIST1H3AP68431 136 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 RELQ04864 619 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 MPPED2Q15777 294 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 Q3ZCU0 254 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 RNASE12Q5GAN4 147 aaKnown RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 HIST2H3PS2Q5TEC6 136 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM108Q6UXF1 575 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 HIST2H3AQ71DI3 136 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 DCXRQ7Z4W1 244 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 NAA40Q86UY6 237 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 OR4F15Q8NGB8 312 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
CCDC171-203ENST00000449575 INTS14Q96SY0 518 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM204Q9BSN7 226 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 FXYD6Q9H0Q3 95 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 CA10Q9NS85 328 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 TIMM10BQ9Y5J6 103 aa8.49□□□□□ -1.05
CCDC171-203ENST00000449575 CELSR1Q9NYQ6 3014 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 A0A0D9SG52 128 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 F5H5P2 479 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PSMD9O00233 223 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-203ENST00000449575 CD3EP07766 207 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ACAA1P09110 424 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF35P13682 527 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF823P16415 610 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PTAFRP25105 342 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ERVS71-1P61550 626 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MRPS10P82664 201 aaKnown RBP8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PCK2Q16822 640 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MSMPQ1L6U9 139 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PAN3Q58A45 887 aaKnown RBP8.48□□□□□ -1.05
CCDC171-203ENST00000449575 SLC22A25Q6T423 547 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MOB3CQ70IA8 216 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 CDC20BQ86Y33 519 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF101Q8IZC7 436 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 SLC30A7Q8NEW0 376 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ST7LQ8TDW4 575 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 POM121L2Q96KW2 1035 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ADGRL4Q9HBW9 690 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ZFP57Q9NU63 452 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 OPN4Q9UHM6 478 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 FLVCR2Q9UPI3 526 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 TEX15Q9BXT5 2789 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 A0A0G2JK05 382 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 C5orf49A4QMS7 147 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 GABARAPH6UMI1 98 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 HTR3BO95264 441 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MNDAP41218 407 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 WNT5AP41221 380 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 OLFML2AQ68BL7 652 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 CEACAM19Q7Z692 300 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 ACBD7Q8N6N7 88 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 FAM169BQ8N8A8 192 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 OR51G2Q8NGK0 314 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 C15orf40Q8WUR7 153 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 THEM6Q8WUY1 208 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 C14orf79Q96F83 325 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PHYHIPLQ96FC7 376 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 MFFQ9GZY8 342 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 PLEKHF2Q9H8W4 249 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 NGBQ9NPG2 151 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 INPP5EQ9NRR6 644 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 RNF115Q9Y4L5 304 aa8.48□□□□□ -1.05
CCDC171-203ENST00000449575 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 TRAV1-2A0A0B4J238 106 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 C5orf63A6NC05 138 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 OR6C6A6NF89 314 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 NUDT19A8MXV4 375 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 E7EQL1 145 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 GPRIN2O60269 458 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 SPDEFO95238 335 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 NGFP01138 241 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 HEXAP06865 529 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 SPP1P10451 314 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM11P17152 192 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 HTR5AP47898 357 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 C21orf62-AS1Q17RA5 79 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 UBE2NLQ5JXB2 153 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 SLC35D3Q5M8T2 416 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 LIN54Q6MZP7 749 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 VHLLQ6RSH7 139 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 SSX6Q7RTT6 188 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms