RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 GMFBP60983 142 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 ABCA11PQ4W5N1 156 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 C12orf73Q69YU5 71 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 WDR82Q6UXN9 313 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 GLB1L2Q8IW92 636 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 KLHL30-AS1Q8NEE0 82 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 OR8J1Q8NGP2 316 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 OR5M8Q8NGP6 311 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 OR8S1Q8NH09 359 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 CAPSLQ8WWF8 208 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 ERMAPQ96PL5 475 aaPredicted RBP9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 GAFA1Q96PS6 74 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 TM2D3Q9BRN9 247 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 ELL3Q9HB65 397 aaPredicted RBP9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 IMPAD1Q9NX62 359 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 BLOC1S6Q9UL45 172 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 TBL2Q9Y4P3 447 aaKnown RBP9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
AC004540.1-204ENST00000449537 LOC100130705A0A1B0GUX0 176 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 A0A1W2PPH5 198 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 PRSS37A4D1T9 235 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 SIGLEC5O15389 551 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 TFF1P04155 84 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 ARG1P05089 322 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 SNRNP70P08621 437 aaKnown RBP9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 ACAA1P09110 424 aaPredicted RBP9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 SLC25A1P53007 311 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 OR12D2P58182 307 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 HIST1H3AP68431 136 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 GINS1Q14691 196 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 MESTQ5EB52 335 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 HIST2H3PS2Q5TEC6 136 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 MEDAGQ5VYS4 303 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 HIST2H3AQ71DI3 136 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 C16orf82Q7Z2V1 217 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 ZNF329Q86UD4 541 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 C11orf42Q8N5U0 333 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 OR2T4Q8NH00 348 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 IL17DQ8TAD2 202 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 MBOAT4Q96T53 435 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 RERGLQ9H628 205 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 VSX1Q9NZR4 365 aaPredicted RBP9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 ADAM18Q9Y3Q7 739 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 GMPPBQ9Y5P6 360 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 IER3IP1Q9Y5U9 82 aa9.97□□□□□ -0.81
AC004540.1-204ENST00000449537 FAM90A22PA8MWA6 464 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 PRODHO43272 600 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 MITFO75030 526 aaPredicted RBP9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 ERVFRD-1P60508 538 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 CSNK2BP67870 215 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF92Q03936 586 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 TMED1Q13445 227 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 SNAPC1Q16533 368 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 KCNMB1Q16558 191 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 ZIK1Q3SY52 487 aaPredicted RBP9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC35D3Q5M8T2 416 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC25A30Q5SVS4 291 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 LCN1P1Q5VSP4 162 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 GID4Q8IVV7 300 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF695Q8IW36 515 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 OR1M1Q8NGA1 313 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 OR4Q3Q8NH05 313 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 ANGPTL6Q8NI99 470 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 FAM81AQ8TBF8 368 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 RFKQ969G6 155 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 Q96M85 177 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 Q96MT0 163 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 YTHDF1Q9BYJ9 559 aaKnown RBP9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 WDR13Q9H1Z4 485 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 MYRFQ9Y2G1 1151 aa9.96□□□□□ -0.82
AC004540.1-204ENST00000449537 IGLV1-36A0A0B4J1U3 117 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 PRR23D1E9PI22 279 aaPredicted RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 DLGAP1O14490 977 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 CDIPTO14735 213 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 LDLRAD4O15165 306 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC16A7O60669 478 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 LYNP07948 512 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 PRR23D2P0DMB1 279 aaPredicted RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 HIST1H1CP16403 213 aaKnown RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 JUNBP17275 347 aaPredicted RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 GABRA2P47869 451 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 SNRPGP62308 76 aaKnown RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 ADARB1P78563 741 aaKnown RBP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF260Q3ZCT1 412 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF691Q5VV52 312 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 NXNL2Q5VZ03 156 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 CORO6Q6QEF8 472 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 THAP5Q7Z6K1 395 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 WDR86Q86TI4 376 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 TMEM163Q8TC26 289 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms