RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 HLXQ14774 488 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 FCN2Q15485 313 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 TBR1Q16650 682 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ST3GAL2Q16842 350 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF626Q68DY1 528 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 TMEM200AQ86VY9 491 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 TMEM17Q86X19 198 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 LIX1LQ8IVB5 337 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF611Q8N823 705 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZDHHC22Q8N966 263 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 OR4K15Q8NH41 348 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 OR51F2Q8NH61 342 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ST8SIA4Q92187 359 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 STARD4Q96DR4 205 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 TINAGL1Q9GZM7 467 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 GPR160Q9UJ42 338 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 EDARQ9UNE0 448 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 TP53TG5Q9Y2B4 290 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 RTTNQ86VV8 2226 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 CACNA1GO43497 2377 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 MED19A0JLT2 244 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 PYCARD-AS1I3L0S3 204 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 K7EM74 188 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 M0QYG6 137 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 SMPD2O60906 423 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 PLATP00750 562 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 CGAP01215 116 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 IGKV3-15P01624 115 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF735P0CB33 412 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 RAC2P15153 192 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 GABRR1P24046 479 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 PMELP40967 661 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 PPP1CBP62140 327 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 CXADRP78310 365 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 FOXF2Q12947 444 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 VAX1Q5SQQ9 334 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 RFPL4BQ6ZWI9 263 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 BHLHA15Q7RTS1 189 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 CD163Q86VB7 1156 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 HOGA1Q86XE5 327 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF573Q86YE8 665 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 GVQW1Q8N7I0 195 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF610Q8N9Z0 462 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 Q8NFD4 153 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 SCGB3A2Q96PL1 93 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 FYTTD1Q96QD9 318 aaKnown RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 SFXN3Q9BWM7 321 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 BEX2Q9BXY8 128 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 RHOFQ9HBH0 211 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 BEX1Q9HBH7 125 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF71Q9NQZ8 489 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 ZNF222Q9UK12 451 aa9.09□□□□□ -0.95
VIPAS39-203ENST00000448935 DMXL1Q9Y485 3027 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 GTF3C1Q12789 2109 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 MEIKINA0A087WXM9 373 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 TMEM82A0PJX8 343 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF732B4DXR9 585 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 PRRG2O14669 202 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNHIT1O43257 154 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 FCER2P06734 321 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 AMY2BP19961 511 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ANXA7P20073 488 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 HRH1P35367 487 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 RAD52P43351 418 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 UCP2P55851 309 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 GNG3P63215 75 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 KCNJ8Q15842 424 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SCGB2B2Q4G0G5 96 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ELP2Q6IA86 826 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SEM1Q6ZVN7 128 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC25A26Q70HW3 274 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC36A1Q7Z2H8 476 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 CXorf67Q86X51 503 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SPICQ8N5J4 248 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 WDR31Q8NA23 367 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 BEST4Q8NFU0 473 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 OR5H2Q8NGV7 314 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 OR5P3Q8WZ94 311 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SNAPC3Q92966 411 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF486Q96H40 463 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 HYLS1Q96M11 299 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 SLC6A7Q99884 636 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 MICU1Q9BPX6 476 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 CHST6Q9GZX3 395 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 PLK3Q9H4B4 646 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 RANBP3Q9H6Z4 567 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 ZNF69Q9UC07 566 aa9.08□□□□□ -0.96
VIPAS39-203ENST00000448935 IGKV1-12A0A0C4DH73 117 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 OR5H1A6NKK0 313 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 TRAPPC2LH3BP13 241 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 IGKV1D-12P01611 117 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 HPXP02790 462 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 DTYMKP23919 212 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 IL32P24001 234 aa9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 CEACAM8P31997 349 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-203ENST00000448935 HAAOP46952 286 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms