RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 ASCL1P50553 236 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 PDCD1Q15116 288 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 Q6ZSR3 168 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 C5orf24Q7Z6I8 188 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 LILRB1Q8NHL6 650 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-209ENST00000448770 SPACA9Q96E40 222 aaPredicted RBP11.89□□□□□ -0.51
POLR1B-209ENST00000448770 NELFAQ9H3P2 528 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 GHRLQ9UBU3 117 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 NXT1Q9UKK6 140 aaKnown RBP11.89□□□□□ -0.51
POLR1B-209ENST00000448770 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 M0R135 149 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 SCRG1O75711 98 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 JTBO76095 146 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
POLR1B-209ENST00000448770 LMO1P25800 156 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
POLR1B-209ENST00000448770 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 FAM3AP98173 230 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 CHAF1BQ13112 559 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 RABEPKQ7Z6M1 372 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 KMT5CQ86Y97 462 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 TDHQ8IZJ6 230 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 TMEM54Q969K7 222 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
POLR1B-209ENST00000448770 IGKV1-12A0A0C4DH73 117 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 A0A1B0GV50 99 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 A0A1W2PR64 198 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 LINC00587B1AMM8 73 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 ZFAND5O76080 213 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 IGKV1D-12P01611 117 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 IFNA4P05014 189 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 PTAFRP25105 342 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 NTF4P34130 210 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 FXYD4P59646 89 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 PIGYQ3MUY2 71 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 C10orf128Q5T292 105 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 EIF5AL1Q6IS14 154 aaKnown RBP11.88□□□□□ -0.51
POLR1B-209ENST00000448770 OPN5Q6U736 354 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 FOXL2NBQ6ZUU3 175 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 SDK2Q58EX2 2172 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 A0A1W2PQM1 296 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 CA11O75493 328 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 APOC1P02654 83 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 PAX6P26367 422 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 EIF5AP63241 154 aaKnown RBP11.88□□□□□ -0.51
POLR1B-209ENST00000448770 NHLH2Q02577 135 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 ZNF616Q08AN1 781 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 DAZAP2Q15038 168 aaPredicted RBP11.88□□□□□ -0.51
POLR1B-209ENST00000448770 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 C15orf54Q8N8G6 183 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 ZIC4Q8N9L1 334 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 GJC3Q8NFK1 279 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 CADM4Q8NFZ8 388 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 PP6455Q8WZ26 134 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 GNRHR2Q96P88 292 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 RBM24Q9BX46 236 aaKnown RBP11.88□□□□□ -0.51
POLR1B-209ENST00000448770 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 RCL1Q9Y2P8 373 aaKnown RBP11.88□□□□□ -0.51
POLR1B-209ENST00000448770 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
POLR1B-209ENST00000448770 LOC102725191A0A1B0GVB3 256 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 FAM230AA0A1W2PPH8 454 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 DANCRP0C864 163 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 PATE4P0C8F1 98 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 PPP1CCP36873 323 aaKnown RBP11.87□□□□□ -0.51
POLR1B-209ENST00000448770 UCP2P55851 309 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 FAM189A2Q15884 450 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 GUK1Q16774 197 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 BATF2Q8N1L9 274 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 OR5L2Q8NGL0 311 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 OR5L1Q8NGL2 311 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 NAA60Q9H7X0 242 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 PROK2Q9HC23 129 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 TSPAN15O95858 294 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 ARG1P05089 322 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 AGAP20933 346 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 CHATP28329 748 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 MTCP1P56278 107 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 RTN4IP1Q8WWV3 396 aaPredicted RBP11.87□□□□□ -0.51
POLR1B-209ENST00000448770 MSI2Q96DH6 328 aaKnown RBP11.87□□□□□ -0.51
POLR1B-209ENST00000448770 S100A13Q99584 98 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 ATPIF1Q9UII2 106 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
POLR1B-209ENST00000448770 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
POLR1B-209ENST00000448770 DHHO43323 396 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms