RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 PIGTQ969N2 578 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 WDR61Q9GZS3 305 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 V9GYH0 126 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 ICAM2P13598 275 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 MDKP21741 143 aaPredicted RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 APLNRP35414 380 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 EOGTQ5NDL2 527 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 MFSD12Q6NUT3 480 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 OR13G1Q8NGZ3 307 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 ZCCHC14Q8WYQ9 949 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 NEURL3Q96EH8 262 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 BARX1Q9HBU1 254 aaPredicted RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 MRPS2Q9Y399 296 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 HMGN4O00479 90 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 PLA2G10O15496 165 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 DUS4LO95620 317 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 CSN3P07498 182 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 MYOGP15173 224 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 CRYBA2P53672 197 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 SLC37A1P57057 533 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 MPV17LQ2QL34 196 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 RGS7BPQ6MZT1 257 aaPredicted RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 OR4D11Q8NGI4 311 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 ARRDC3Q96B67 414 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 PIGLQ9Y2B2 252 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 TANC1Q9C0D5 1861 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 HEPACAM2A8MVW5 462 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SNURFLB1AK76 121 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SFT2D2O95562 160 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 HNRNPA1P09651 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC6-207ENST00000448223 MUC1P15941 1255 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 ATF1P18846 271 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 DEFB110Q30KQ9 67 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 HNRNPA1L2Q32P51 320 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 ZNF296Q8WUU4 475 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 HHIPQ96QV1 700 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 OR2A5Q96R48 311 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ASCL3Q9NQ33 180 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 CMC2Q9NRP2 79 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 LOC107986453A0A1B0GWG9 222 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 FIGNL2A6NMB9 653 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 G3V3Y1 287 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 HPXP02790 462 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 FPR2P25090 351 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 KLF3P57682 345 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 ARF6P62330 175 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PRSS53Q2L4Q9 553 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ZNF776Q68DI1 518 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 LINC00346Q8IVM7 164 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SLC16A11Q8NCK7 471 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 RGP1Q92546 391 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 SIGMAR1Q99720 223 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 NDFIP1Q9BT67 221 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 NDUFAF3Q9BU61 184 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 TMPRSS13Q9BYE2 586 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 CPEB1Q9BZB8 566 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 NCBP2LA6PVI3 153 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 PVRP15151 417 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 NUFIP2Q7Z417 695 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ISG20L2Q9H9L3 353 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 KNTC1P50748 2209 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ANKRD36A6QL64 1941 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PGA4P0DJD7 388 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PGA5P0DJD9 388 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 CD79AP11912 226 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 GALP22466 123 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 IER3P46695 156 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PCBP3P57721 371 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 BPIFB3P59826 476 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PCBD1P61457 104 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PLPPR5Q32ZL2 321 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 TMEM255AQ5JRV8 349 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 OR2M3Q8NG83 312 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 DIO2Q92813 273 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 MRPS24Q96EL2 167 aaKnown RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 ABHD1Q96SE0 405 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SLC25A19Q9HC21 320 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PISDQ9UG56 409 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 VAX2Q9UIW0 290 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 A0A1B0GWA3 101 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ARRDC5A6NEK1 342 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 PRRT4C9JH25 899 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 LMX1BO60663 402 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 ONECUT2O95948 504 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 SEMG1P04279 462 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 OPRM1P35372 400 aa8.26□□□□□ -1.09
SMC6-207ENST00000448223 CEBPDP49716 269 aaPredicted RBP8.26□□□□□ -1.09
SMC6-207ENST00000448223 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.092e-6■■■■■ 40.2
SMC6-207ENST00000448223 FGF8P55075 233 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms