RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SMIM19Q96E16 107 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 OPALINQ96PE5 141 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 MND1Q9BWT6 205 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 OR14J1Q9UGF5 321 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 OR5V1Q9UGF6 321 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
SNHG4-201ENST00000448190 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 C22orf46C9J442 243 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 DENRO43583 198 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 RRP9O43818 475 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 HCKP08631 526 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 HSMCR30P0CW71 290 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 BCL3P20749 454 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 PRDX2P32119 198 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 SNU13P55769 128 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 INSL4Q14641 139 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 SPHARQ15513 63 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 RBM48Q5RL73 367 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 RNLSQ5VYX0 342 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 BTN2A1Q7KYR7 527 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 CD177Q8N6Q3 437 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 ZNRF1Q8ND25 227 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 DNAAF1Q8NEP3 725 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 OR51A2Q8NGJ7 313 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 RAB40AQ8WXH6 277 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 TMEM106AQ96A25 262 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 GAFA1Q96PS6 74 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 NRIP2Q9BQI9 281 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 PKIBQ9C010 78 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 OPN4Q9UHM6 478 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 POLDIP2Q9Y2S7 368 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 LSM2Q9Y333 95 aaKnown RBP11.1□□□□□ -0.63
SNHG4-201ENST00000448190 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
SNHG4-201ENST00000448190 A8MXK9 166 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 NDUFB3O43676 98 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 SULT1B1O43704 296 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 ACAA1P09110 424 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 TMEM225BP0DP42 221 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 SRD5A1P18405 259 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 RAB3AP20336 220 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 HNF1AP20823 631 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 PCMT1P22061 227 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 MPZP25189 248 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 DUSP1P28562 367 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 TAS2R43P59537 309 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 PAX2Q02962 417 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 IL24Q13007 206 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 PDZK1IP1Q13113 114 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 DGUOKQ16854 277 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 ATPAF1Q5TC12 328 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 CRIP3Q6Q6R5 217 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 SLC36A1Q7Z2H8 476 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 PRIMA1Q86XR5 153 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 MKXQ8IYA7 352 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 OR52N4Q8NGI2 321 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 C12orf43Q96C57 262 aaKnown RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 CEP19Q96LK0 163 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 OR14A2Q96R54 314 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 NUDT16L1Q9BRJ7 211 aaKnown RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 TMED9Q9BVK6 235 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 Q9H521 79 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 ELL3Q9HB65 397 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 NEK6Q9HC98 313 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 RASL12Q9NYN1 266 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 IL36RNQ9UBH0 155 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-201ENST00000448190 MAB21L2Q9Y586 359 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 AUP1Q9Y679 476 aa11.09□□□□□ -0.63
SNHG4-201ENST00000448190 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.63
SNHG4-201ENST00000448190 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 IGKV1-12A0A0C4DH73 117 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 TRBV5-5A0A0J9YX44 114 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 KIR2DS1A0A191URI9 304 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 IGKV1D-12P01611 117 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 CD2P06729 351 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 NDUFB7P17568 137 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 CPT2P23786 658 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 TGFBR2P37173 567 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 CAPZA1P52907 286 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 KISS1Q15726 138 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 YIF1BQ5BJH7 314 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 LIPKQ5VXJ0 399 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 PRSS48Q7RTY5 328 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 C1QL2Q7Z5L3 287 aa11.08□□□□□ -0.64
SNHG4-201ENST00000448190 TMEM203Q969S6 136 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms