RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 B3GALT1Q9Y5Z6 326 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 PIGPP57054 158 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 PEA15Q15121 130 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 HIST3H3Q16695 136 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 CDCP2Q5VXM1 449 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.28□□□□□ -0.6
SHC1-210ENST00000448116 TMEM156Q8N614 296 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 SHDQ96IW2 340 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
SHC1-210ENST00000448116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.28□□□□□ -0.6
SHC1-210ENST00000448116 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
SHC1-210ENST00000448116 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
SHC1-210ENST00000448116 CCL3P10147 92 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 LSM6P62312 80 aaKnown RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 SPEM2Q0P670 501 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 KCNMB1Q16558 191 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 PP6455Q8WZ26 134 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 REEP6Q96HR9 211 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 PRRX2Q99811 253 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 RCC2Q9P258 522 aaKnown RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 CHCHD2Q9Y6H1 151 aaPredicted RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 C9JQL5 133 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 TNFSF11O14788 317 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 NME2P1O60361 137 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 OR8U9P0C7N5 309 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 SPP1P10451 314 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 RAB13P51153 203 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 SHBQ15464 509 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 DHRS7BQ6IAN0 325 aaPredicted RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 OR8U1Q8NH10 309 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 SPTSSAQ969W0 71 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 PTRH2Q9Y3E5 179 aaKnown RBP11.27□□□□□ -0.61
SHC1-210ENST00000448116 CACNA1EQ15878 2313 aa11.27□□□□□ -0.61
SHC1-210ENST00000448116 PI4KAP42356 2102 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 NUDT19A8MXV4 375 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 ACKR3P25106 362 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SSC4DQ8WTU2 575 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 MR1Q95460 341 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 FBXO17Q96EF6 278 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SAT2Q96F10 170 aaPredicted RBP11.26□□□□□ -0.61
SHC1-210ENST00000448116 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 AK3Q9UIJ7 227 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 CST4P01036 141 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 ZNF84P51523 738 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 DPPA2Q7Z7J5 298 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 OR5L1Q8NGL2 311 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 AKR7LQ8NHP1 331 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 ERGIC1Q969X5 290 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
SHC1-210ENST00000448116 METTL9Q9H1A3 318 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 CHRDQ9H2X0 955 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 TAAR5O14804 337 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 NDUFB7P17568 137 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 RFC3P40938 356 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 AVPI1Q5T686 147 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
SHC1-210ENST00000448116 OR9K2Q8NGE7 335 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 RNF138Q8WVD3 245 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 LIME1Q9H400 295 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
SHC1-210ENST00000448116 SHANK1Q9Y566 2161 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 TSPAN15O95858 294 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 PRH1P02810 166 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 OR5AC1P0C628 307 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 ZNF728P0DKX0 622 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 LYL1P12980 280 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 ASCL1P50553 236 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 IL15RAQ13261 267 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 DNASE2BQ8WZ79 361 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 FAM186AA6NE01 2351 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 A0A0U1RQV5 110 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 ZNHIT1O43257 154 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 ARL6IP1Q15041 203 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 DHRS11Q6UWP2 260 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 LYZL2Q7Z4W2 148 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 MAML2Q8IZL2 1156 aaPredicted RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 FADS6Q8N9I5 356 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 RTN4IP1Q8WWV3 396 aaPredicted RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 BORCS8Q96FH0 119 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 KIRREL1Q96J84 757 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 NAA11Q9BSU3 229 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms