RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TMEM14DPA8MWL7 114 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 MPIG6BO95866 241 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 SFTPBP07988 381 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 BCL3P20749 454 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 NPBWR2P48146 333 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 PLA2G7Q13093 441 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 BATF2Q8N1L9 274 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 PTX4Q96A99 478 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 ZNF488Q96MN9 340 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 RAB1BQ9H0U4 201 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 MIXL1Q9H2W2 232 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 BANF2Q9H503 90 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 RHBDL2Q9NX52 303 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 PPP1R3CQ9UQK1 317 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 FASNP49327 2511 aaKnown RBP16.51■□□□□ 0.23
SGCE-207ENST00000447873 DYSFO75923 2080 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 FAM25AB3EWG3 89 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 FAM25CB3EWG5 89 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 FAM25GB3EWG6 89 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 AKR7A2O43488 359 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 CDC14BO60729 498 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 APOA1P02647 267 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 PGA5P0DJD9 388 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 GTF2F2P13984 249 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 MGMTP16455 207 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 ELK1P19419 428 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 RAB6AP20340 208 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 EFNB2P52799 333 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 CDH24Q86UP0 819 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 LRRC28Q86X40 367 aaPredicted RBP16.5■□□□□ 0.23
SGCE-207ENST00000447873 Q8IYB0 196 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 SLC25A38Q96DW6 304 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 GAL3ST1Q99999 423 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 TMEM59Q9BXS4 323 aa16.5■□□□□ 0.23
SGCE-207ENST00000447873 RBFOX1Q9NWB1 397 aaKnown RBP16.5■□□□□ 0.23
SGCE-207ENST00000447873 EIF4EP06730 217 aaKnown RBP16.49■□□□□ 0.23
SGCE-207ENST00000447873 ACAA1P09110 424 aaPredicted RBP16.49■□□□□ 0.23
SGCE-207ENST00000447873 LINC00299Q6ZSB3 139 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 OSR2Q8N2R0 312 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 OR11L1Q8NGX0 322 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 LRRC29Q8WV35 223 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 MRPS24Q96EL2 167 aaKnown RBP16.49■□□□□ 0.23
SGCE-207ENST00000447873 SELENOIQ9C0D9 397 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 TREM2Q9NZC2 230 aa16.49■□□□□ 0.23
SGCE-207ENST00000447873 METTL21EPA6NDL7 271 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 F8VVB4 439 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 F8VWA3 439 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 HPXP02790 462 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 TNFSF8P32971 234 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 PMELP40967 661 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 FAM189A2Q15884 450 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 ELP2Q6IA86 826 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 CMTM4Q8IZR5 234 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 POC1AQ8NBT0 407 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 OR10Z1Q8NGY1 313 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 Q8TCH9 128 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 RAB40AQ8WXH6 277 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 S100A16Q96FQ6 103 aaKnown RBP16.48■□□□□ 0.23
SGCE-207ENST00000447873 DIRAS2Q96HU8 199 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 WDFY2Q96P53 400 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 NRIP2Q9BQI9 281 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
SGCE-207ENST00000447873 ATG5Q9H1Y0 275 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 ABCG5Q9H222 651 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 RHOFQ9HBH0 211 aa16.48■□□□□ 0.23
SGCE-207ENST00000447873 AKAP6Q13023 2319 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 H7C417 338 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 NOS1APO75052 506 aaPredicted RBP16.47■□□□□ 0.23
SGCE-207ENST00000447873 NXPH2O95156 264 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 IRF2P14316 349 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 SSTR2P30874 369 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 CFHR2P36980 270 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 TALDO1P37837 337 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 GMFBP60983 142 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 FAM58AQ8N1B3 248 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 Q8NFD4 153 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 HPS1Q92902 700 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 EMG1Q92979 244 aaKnown RBP16.47■□□□□ 0.23
SGCE-207ENST00000447873 MARVELD3Q96A59 401 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 PHF21AQ96BD5 680 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 RNF7Q9UBF6 113 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 TACC2O95359 2948 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 LRRC30A6NM36 301 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 PRKACAP17612 351 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 GLRA1P23415 457 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 CDKN1AP38936 164 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 FGF12P61328 243 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 ERVK11-1P61568 191 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 RPS27AP62979 156 aaKnown RBP16.47■□□□□ 0.23
SGCE-207ENST00000447873 CNIH2Q6PI25 160 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 OR51T1Q8NGJ9 327 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 NEU4Q8WWR8 484 aaPredicted RBP16.47■□□□□ 0.23
SGCE-207ENST00000447873 LPAR5Q9H1C0 372 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 ST3GAL6Q9Y274 331 aa16.47■□□□□ 0.23
SGCE-207ENST00000447873 IGHV1-69-2A0A0G2JMI3 117 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 CPT2P23786 658 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 LSAMPQ13449 338 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 SPANXN2Q5MJ10 180 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms